Job Description P23524 Confidence 43.69% Date Thu Jan 5 11:39:34 GMT 2012 Rank 79 Aligned Residues 143 % Identity 9% Template c2yvaB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dnaa initiator-associating protein diaa; PDBTitle: crystal structure of escherichia coli diaa Resolution 1.85 Å

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		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.													.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Query Sequence		V	E	L	D	N	N	L	S	H	Y	A	E	V	I	K	K	A	L	H	V	D	V	K	D	V	P	G	A	G	A	A	G	G	M	G	A	A	L	M	A	F	L	G	A	E	L	K	S	G	.	.	.	.	.	.	.	.	.	.	.	.	I	E	I	V	T	T	A	L	N	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.
Template Sequence		D	A	I	S	R	A	A	M	T	L	V	Q	S	L	L	N	G	N	K	I	L	C	C	.	.	.	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T	D	N	V	V	L	T	A	I	A	N	D	R	L	H	D	E	V	Y	A	K
Template Known Secondary structure																	T	T							.	.	.		S	T															T		S	S	S										S	S										T	T	S	T	T	G	G	G	T	T
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
			278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	L	E	E	H	I	H	D	C	T	L	V	I	T	G	E	G	R	I	D	S	Q	S	I	H	G	K	V	P	I	G	V	A	N	V	A	K	K	Y	H	K	P	V	I	G	I	A	G	S	L	T	D	D	V	G	V	V	H	Q	H	G	I	D	A	V	F	S	V	L	T	S	I	G	T	L	D	E	A	F	R
Query Conservation		.
Alig confidence		.													.	.	.	.			.
Template Conservation															.	.	.	.			.
Template Sequence		Q	V	R	A	L	G	H	A	G	D	V	L	L	.	.	.	.	A	I	.	S	T	R	G	N	S	R	D	I	V	K	A	V	E	A	A	V	T	R	D	M	T	I	V	A	L	T	G	Y	D	G	G	E	L	A	G	L	L	G	P	Q	D	V	E	I	R	I	P	S	H	R	S	A	R	I	Q	E	M	H	M
Template Known Secondary structure									T	T					.	.	.	.			.		S	S	S															T	T									T	T										T	T							S		S
Template Predicted Secondary structure															.	.	.	.			.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.					.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	Y	D	N	I	C	R	A	S	R	N	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	V	N	C	L	C	D	L	I	D	N	T	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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