Return to main results Retrieve Phyre Job Id

Job DescriptionP77668
Confidence100.00%DateThu Jan 5 12:31:30 GMT 2012
Rank1Aligned Residues135
% Identity32%Templated2fug61
SCOP infoHydA/Nqo6-like HydA/Nqo6-like Nq06-like
Resolution3.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70.........80.........90........
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYES
Query Conservation         
     


 
  

 





 


 
   
 

 




  













 

 


  
 
 


Alig confidence 






















.

..






................




























Template Conservation   
       
 
  


    
 .

..
 

   ................



 







 

 


  
   


Template Sequence  FTTLEKLVAWGRSNSLWPATFGL. AC. . CAIEMMA. . . . . . . . . . . . . . . . STDAQADVMIVAGRLSKKMAPVMRRVWEQ
Template Known Secondary structure 






.S..TGG................G






S

BTTTT
Template Predicted Secondary structure 






.

..






................






Template SS confidence 















































































   21........30.........40... .. ....50.. .......60.........70.........80.
 
   99100.........110.........120.........130.........140.........150.........160.........170.......
Predicted Secondary structure 












































Query SS confidence 














































































Query Sequence  APDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQ
Query Conservation 




 


 



 




 




  


 


















 

  
 
 
  
               
Alig confidence 



















.


































....


















Template Conservation 

 

 


 
 

  

 
.  
 
  


  



  





 




 

  ....
  

       
     
Template Sequence  MPDPKWVISMGACASSGGMF. NNYAIVQNVDSVVPVDVYVPGCPPRPEALIYAVMQ. . . . LQKKVRGQAYNERGERLPP
Template Known Secondary structure  S
SS

S
TT
.
STTB
S
GGGTS

S

SS

....SS


SSS



S
Template Predicted Secondary structure 














.



















....








Template SS confidence 














































































   99100.........110........ .120.........130.........140.........150... ......160.........170..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions