Job Description P77668 Confidence 99.87% Date Thu Jan 5 12:31:30 GMT 2012 Rank 9 Aligned Residues 125 % Identity 28% Template d1cc1s_ SCOP info HydA/Nqo6-like HydA/Nqo6-like Nickel-iron hydrogenase, small subunit Resolution 2.15

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60																							.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	S	A	Y	V	Y	R	V	D	C	G	G	C	N	A	C	E	I	E	I	F	A	A	I	T	P	V	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	R	F	G	I	K	V	V	S	S	P	R	H	A	D	I	L	L	F	T	G	A	V	T	R	A	M	R
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	A	P	V	I	W	V	Q	G	Q	G	C	T	G	C	S	V	S	L	L	N	A	V	H	P	R	I	K	E	I	L	L	D	V	I	S	L	E	F	H	P	T	V	M	A	S	E	G	E	M	A	L	A	H	M	Y	E	I	A	E	K	F	N	G	N	F	F	L	L	V	E	G	A	I	P	T	A	K	E
Template Known Secondary structure											S	B			S								T		B	T	T	B								T							T	T	T		S																	T	T	T	S	S						S	B				G	G	G
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
																		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.									.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	P	A	L	R	A	Y	E	S	A	P	D	H	K	I	C	V	S	Y	G	A	C	G	V	G	G	G	I	F	H	D	L	Y	S	V	W	G	.	.	.	.	.	.	.	.	G	S	D	T	I	V	P	I	D	V	W	I	P	G	C	P	P	T	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	Y	C	I	V	G	E	A	K	A	H	H	H	E	V	T	M	M	E	L	I	R	D	L	A	P	K	S	L	A	T	V	A	V	G	T	C	S	A	Y	G	G	I	P	A	A	E	G	N	V	T	G	S	K	S	V	R	D	F	F	A	D	E	K	I	E	K	L	L	V	N	V	P	G	C	P	P	H	P
Template Known Secondary structure		G	T	T								S	S	S													G	G	G	S	S						S							T	G	G	G	S	T	T			S													T											S	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	T	I	H	G	F	A	V	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	W	M	V	G	T	L	V	A	A	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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