Job Description P77668 Confidence 12.93% Date Thu Jan 5 12:31:30 GMT 2012 Rank 69 Aligned Residues 68 % Identity 19% Template c2zbkB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of an intact type ii dna topoisomerase:2 insights into dna transfer mechanisms Resolution 3.56 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.					.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.																			.	.	.	.
Query SS confidence																																						.	.	.	.	.																			.	.	.	.
Query Sequence		P	Q	I	P	P	S	Q	R	I	A	I	E	R	E	A	R	R	L	A	G	Y	R	Q	G	R	E	I	C	D	R	L	L	R	H	L	S	.	.	.	.	.	D	D	P	T	G	N	R	V	N	T	W	L	R	D	A	D	D	P	.	.	.	.	R	L	N	S	I	V	Q	Q	L	F	R	V	L	R
Query Conservation																																						.	.	.	.	.																			.	.	.	.
Alig confidence																																						.	.	.	.	.																			.	.	.	.
Template Conservation
Template Sequence		E	N	I	E	K	E	I	K	N	A	L	M	E	V	A	R	K	L	K	Q	Y	L	S	E	K	R	K	E	Q	E	A	K	K	K	L	L	A	Y	L	K	Y	I	P	E	V	S	R	S	L	A	T	F	L	A	S	G	N	K	E	L	V	S	K	Y	Q	N	E	I	S	E	G	L	F	K	L	I	S
Template Known Secondary structure																							T	T																			T	T									T	T			S	T	T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions