Return to main results Retrieve Phyre Job Id

Job DescriptionP77668
Confidence31.76%DateThu Jan 5 12:31:30 GMT 2012
Rank21Aligned Residues38
% Identity29%Templatec2rf4B_
PDB info PDB header:transferaseChain: B: PDB Molecule:dna-directed rna polymerase i subunit rpa4; PDBTitle: crystal structure of the rna polymerase i subcomplex a14/43
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   213......220........ .230.. .......240.........250
Predicted Secondary structure 



.

....


Query SS confidence 















.



. . . .

















Query Sequence  RHLSDDPTGNRVNTWL. RDAD. . . . DPRLNSIVQQLFRVLRGL
Query Conservation                  .    ....
 
       
       
Alig confidence 















.



....

















Template Conservation 





  
 

  

 


     

 














Template Sequence  QHVSTDEVLQFLESFIDEKENIIDIDTNLSSSISQLKRIQRDF
Template Known Secondary structure 



SSS


TT
Template Predicted Secondary structure 



Template SS confidence 










































   2930.........40.........50.........60.........70.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions