 |
Job Description | P60720 | Confidence | 10.09% | Date | Thu Jan 5 12:07:03 GMT 2012 |
Rank | 26 | Aligned Residues | 46 |
% Identity | 11% | Template | c3uotB_ |
PDB info |
PDB header:cell cycle | Chain: B: PDB Molecule:mediator of dna damage checkpoint protein 1; |
PDBTitle: crystal structure of mdc1 fha domain in complex with a phosphorylated2 peptide from the mdc1 n-terminus
|
Resolution | 1.80 Å |
|
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | Y | P | V | F | T | Q | G | Q | A | G | K | A | E | H | I | L | M | P | G | D | I | . |
. |
. |
. |
. |
P | V | I | Q | S | D | R | G | G | Q | V | T | Y | H | G | P | G | Q | Q | V | M | Y | V | L |
Query Conservation |   |
|   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |
| . | . | . | . | . |   |
|   |
|
|   |
|
|
|
|   |
|
|
|   |
|
|
|
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|
|
|   |   |   |   |
|
|   |
|   |   |   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|
|   |
|
Template Sequence |   |
H | L | G | K | N | V | V | G | R | X | P | D | C | S | V | A | L | P | F | P | S | I | S | K | Q | H | A | E | I | E | I | L | A | W | D | K | A | P | I | L | R | D | C | G | S | L | N | G | T | Q | I |
Template Known Secondary structure |   |
| S |  |  |  |  |  |  | S | S | T | T | S | S |  |  |
|
|
| T | T | S |
| T | T |
|  |  |  |  |  |
|
| T | T | S |
|
|  |  |  |  |
| S |
| S | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|