Job Description P60720 Confidence 100.00% Date Thu Jan 5 12:07:03 GMT 2012 Rank 2 Aligned Residues 201 % Identity 32% Template c2qhvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:lipoyltransferase; PDBTitle: structural basis of octanoic acid recognition by lipoate-protein2 ligase b Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																.																									.	.	.	.	.	.
Query SS confidence																																.																									.	.	.	.	.	.
Query Sequence		K	I	L	V	R	Q	L	G	L	Q	P	Y	E	P	I	S	Q	A	M	H	E	F	T	D	T	R	D	D	S	T	.	L	D	E	I	W	L	V	E	H	Y	P	V	F	T	Q	G	Q	A	G	K	A	E	H	I	.	.	.	.	.	.	L	M	P	G	D	I	P	V	I	Q	S	D	R	G	G	Q	V	T	Y
Query Conservation																																.																									.	.	.	.	.	.
Alig confidence																																.																									.	.	.	.	.	.
Template Conservation
Template Sequence		E	F	L	V	E	D	L	G	L	V	P	Y	G	E	A	W	A	Y	Q	K	R	V	H	R	E	V	V	A	G	N	R	P	P	T	L	L	L	L	E	H	P	R	V	I	T	L	G	R	K	A	T	G	E	N	L	L	F	P	E	S	W	Y	R	E	N	G	F	E	L	Y	W	V	E	R	G	G	D	V	T	Y
Template Known Secondary structure																													T	T		S										S	S						T	T			G	G	G	B	S	S								T	T								S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	P	G	Q	Q	V	M	Y	V	L	L	N	L	K	R	R	K	L	G	V	R	E	L	V	T	L	L	E	Q	T	V	V	N	T	L	A	E	L	G	I	E	A	H	P	R	A	D	A	P	G	V	Y	V	G	E	K	K	I	C	S	L	G	L	R	I	R	R	G	C	S	F	H	G	L	A	L	N	V	N
Query Conservation
Alig confidence																		.	.	.
Template Conservation																		.	.	.
Template Sequence		H	G	P	G	Q	L	V	G	Y	P	I	F	P	V	G	R	.	.	.	E	V	R	R	F	L	R	Q	I	E	E	A	I	V	R	V	A	A	G	Y	G	I	S	A	Y	P	T	P	G	Y	A	G	V	W	V	G	E	D	K	L	C	A	I	G	V	A	V	K	E	G	V	S	F	H	G	F	A	L	N	V	N
Template Known Secondary structure				T	T											T	T	.	.	.																				T	T				B			S	S	S	S	S				T	T												T	T										S	S
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		M	D	L	S	P	F	L	R	I	N	P	C	G	Y	A	G	M	E	M	A	K	I	S	Q	W	.	K	P	E	A	T	T	N	N	I	A	P	R	L	L	E	N	I	L	A	L	L	N	N	P	D	F
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		T	D	L	N	D	F	T	V	I	V	P	C	G	L	K	G	K	G	V	T	S	L	E	K	L	L	G	R	K	V	P	M	E	E	A	K	A	R	V	V	A	A	F	A	E	V	F	G	L	R	P	V
Template Known Secondary structure				G	G	G	G	G	G	B				S	S			S										T	S																				T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions