Job Description P60720 Confidence 100.00% Date Thu Jan 5 12:07:03 GMT 2012 Rank 4 Aligned Residues 195 % Identity 16% Template c1x2gB_ PDB info PDB header:ligase Chain: B: PDB Molecule:lipoate-protein ligase a; PDBTitle: crystal structure of lipate-protein ligase a from2 escherichia coli Resolution 2.40 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.
Query Sequence		D	K	I	L	V	R	Q	L	G	L	Q	P	Y	E	P	I	S	Q	A	M	H	E	F	T	D	T	R	D	D	S	T	L	D	E	I	W	L	V	E	H	Y	P	V	F	T	Q	G	Q	A	G	K	A	E	.	.	.	.	.	H	I	L	M	P	G	D	I	P	V	I	Q	S	D	R	G	G	Q	V	T	Y	H
Query Conservation																																																							.	.	.	.	.
Alig confidence																																	.																						.	.	.	.	.
Template Conservation																																	.
Template Sequence		S	T	L	R	L	L	I	S	D	S	Y	D	P	W	F	N	L	A	V	E	E	C	I	F	R	Q	X	P	A	T	Q	.	R	V	L	F	L	W	R	N	A	D	T	V	V	I	G	R	A	Q	N	P	W	K	E	C	N	T	R	R	X	E	E	D	N	V	R	L	A	R	R	S	S	G	G	G	A	V	F	H
Template Known Secondary structure																											T	S		T	T	S	.									S	S						T	T							B									T							S	S
Template Predicted Secondary structure																																	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		G	P	G	Q	Q	V	M	Y	V	L	L	N	L	K	R	R	K	L	G	V	R	E	L	V	T	L	L	E	Q	T	V	V	N	T	L	A	E	L	G	I	E	A	H	P	R	A	D	A	P	G	V	Y	V	G	E	.	.	.	.	K	K	I	C	S	L	G	L	R	I	R	R	G	C	S	F	H	G	L	A	L
Query Conservation																																																									.	.	.	.
Alig confidence																			.	.	.	.	.	.																								.									.	.	.	.
Template Conservation																			.	.	.	.	.	.																								.
Template Sequence		D	L	G	N	T	C	F	T	F	X	A	G	K	P	E	Y	D	.	.	.	.	.	.	K	T	I	S	T	S	I	V	L	N	A	L	N	A	L	G	V	S	A	E	A	S	G	.	R	N	D	L	V	V	K	T	V	E	G	D	R	K	V	S	G	S	A	Y	R	E	T	K	D	R	G	F	H	H	G	T	L
Template Known Secondary structure			T	T										T	T	T			.	.	.	.	.	.																T							T	.	T	T							S	S														S	S
Template Predicted Secondary structure																			.	.	.	.	.	.																								.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		155	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		N	V	N	M	D	.	.	.	L	S	P	F	L	R	I	N	P	C	G	Y	A	G	M	E	M	A	K	I	S	Q	W	K	P	E	A	T	T	N	N	I	A	P	R	L	L	E	N	I	L	A	L	L	N	N	P
Query Conservation							.	.	.
Alig confidence							.	.	.
Template Conservation
Template Sequence		L	L	N	A	D	L	S	R	L	A	N	Y	L	N	P	D	K	K	K	L	A	A	K	R	V	T	N	L	T	E	L	L	P	G	I	T	H	E	Q	V	C	E	A	I	T	E	A	F	F	A	H	Y	G	E	R
Template Known Secondary structure			S	S			T	T	T	G	G	G	T	B												B							S	T	T																			T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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