Job Description P0ADR8 Confidence 100.00% Date Thu Jan 5 11:21:41 GMT 2012 Rank 1 Aligned Residues 445 % Identity 62% Template c3bq9A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted rossmann fold nucleotide-binding domain- PDBTitle: crystal structure of predicted nucleotide-binding protein from2 idiomarina baltica os145 Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	H	I	S	P	L	G	S	M	D	M	L	S	Q	L	E	V	D	M	L	K	R	T	A	S	S	D	L	Y	Q	L	F	R	N	C	S	L	A	V	L	N	S	G	S	L	T	D	N	S	K	E	L	L	S	R	F	E	N	F	D	I	N	V	L	R	R	E	R	G	V	K	L	E	L	I	N	P	P	E
Query Conservation
Alig confidence																																																		.	.	.	.
Template Conservation																																																		.	.	.	.
Template Sequence		L	A	S	I	S	P	Q	G	S	M	S	L	L	S	Q	L	E	I	E	R	L	K	A	S	S	N	S	Q	L	Y	K	L	F	R	N	C	C	L	A	V	L	N	A	G	S	S	A	D	.	.	.	.	I	Y	D	S	Y	K	D	F	E	V	N	I	I	R	R	E	R	G	I	K	L	E	L	I	E	P	P	E
Template Known Secondary structure								S	S	G	G	G	G										T	S	G	G	G																T				T	T	T	.	.	.	.	S	T	T	T		T	T									T	T								S			G
Template Predicted Secondary structure																																																		.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	F	V	D	G	R	I	I	R	A	L	Q	A	N	L	F	A	V	L	R	D	I	L	F	V	Y	G	Q	I	H	N	T	V	R	F	P	N	L	N	L	D	N	S	V	H	I	T	N	L	V	F	S	I	L	R	N	A	R	A	L	H	V	G	E	A	P	N	M	V	V	C	W	G	G	H	S	I	N	E
Query Conservation
Alig confidence																																			.	.	.	.
Template Conservation																																			.	.	.	.
Template Sequence		E	A	F	V	D	G	E	V	I	V	G	I	R	E	L	L	E	S	V	L	R	D	I	L	F	T	G	E	R	Y	S	E	T	.	.	.	.	D	L	E	H	A	D	S	A	T	L	T	H	V	V	F	D	I	L	R	N	A	R	T	L	R	P	Q	E	E	P	N	M	V	V	C	W	G	G	H	S	I	N	E
Template Known Secondary structure		G	G			T	T																												.	.	.	.					S																T	T				T	T			S									S	S
Template Predicted Secondary structure																																			.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.					.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	Y	L	Y	A	R	R	V	G	N	Q	L	G	L	R	E	L	N	I	C	T	G	C	G	P	G	A	M	E	A	P	M	K	G	A	A	V	G	H	A	Q	Q	R	Y	K	D	S	R	F	I	G	M	T	E	P	S	I	I	A	A	E	P	P	N	P	L	V	N	E	L	I	I	M	P	D	I	E	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	Y	K	Y	T	K	D	V	G	Y	H	I	G	L	R	G	L	N	I	C	T	G	C	G	P	G	A	M	K	G	P	M	K	G	A	T	I	G	H	A	K	Q	R	V	E	G	G	R	Y	L	G	L	T	E	P	G	I	I	A	A	E	P	P	N	P	I	V	N	E	L	V	I	L	P	D	I	E	K	R
Template Known Secondary structure																	T	T								S	S	G	G	G	T													T	T		S	S									T	T	T	T	T	T	S				T	T		S						S	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	A	F	V	R	I	A	H	G	I	I	I	F	P	G	G	V	G	T	A	E	E	L	L	Y	L	L	G	I	L	M	N	P	A	N	K	D	Q	V	L	P	L	I	L	T	G	P	K	E	S	A	D	Y	F	R	V	L	D	E	F	V	V	H	T	L	G	E	N	A	R	R	H	Y	R	I	I	I	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	A	F	V	R	C	A	H	G	I	V	I	F	P	G	G	A	G	T	A	E	E	L	L	Y	L	L	G	I	L	M	H	P	D	N	Q	R	Q	S	L	P	V	I	L	T	G	P	A	S	S	R	D	Y	F	E	A	L	D	E	F	I	G	A	T	I	G	D	E	A	R	Q	L	Y	K	I	I	I	D	D
Template Known Secondary structure										S						S		S															T	S	G	G	G	T	T											G	G	G															T		T	T	G	G	G	G						S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	E	V	A	R	Q	M	K	K	S	M	P	L	V	K	E	N	R	R	D	T	G	D	A	Y	S	F	N	W	S	M	R	I	A	P	D	L	Q	M	P	F	E	P	S	H	E	N	M	A	N	L	K	L	Y	P	D	Q	P	V	E	V	L	A	A	D	L	R	R	A	F	S	G	I	V	A	G	N	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	A	V	A	Q	H	M	H	A	G	M	A	A	V	K	Q	Y	R	R	D	S	G	D	A	Y	Y	F	N	W	T	L	K	I	N	E	E	F	Q	R	P	F	S	P	T	H	E	N	V	A	A	L	N	L	H	P	D	Q	P	K	E	R	L	A	A	D	L	R	R	A	F	S	A	I	V	A	G	N	V	K
Template Known Secondary structure																							T	T			S	S	S			S					G	G	G	T	S											T			B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	G	I	R	A	I	E	E	F	G	P	Y	K	I	N	G	D	K	E	I	M	R	R	M	D	D	L	L	Q	G	F	V	A	Q	H	R	M	K	L	P	G	S	A	Y	I	P	C	Y	E	I	C	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	G	I	R	Q	I	R	K	N	G	V	F	T	I	H	G	E	Q	S	L	M	K	R	L	D	E	L	L	R	A	F	V	E	Q	G	R	M	K	L	P	G	S	V	Y	N	P	C	Y	K	V	I	T
Template Known Secondary structure													S					B																		T	T		S	S		T	T	S					S
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450