Job Description P0ADR8 Confidence 100.00% Date Thu Jan 5 11:21:41 GMT 2012 Rank 5 Aligned Residues 174 % Identity 19% Template c2q4dB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:lysine decarboxylase-like protein at5g11950; PDBTitle: ensemble refinement of the crystal structure of a lysine2 decarboxylase-like protein from arabidopsis thaliana gene at5g11950 Resolution 2.15 Å

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		149	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure														.	.																												.
Query SS confidence														.	.																												.
Query Sequence		N	M	V	V	C	W	G	G	H	S	I	N	.	.	E	N	E	Y	L	Y	A	R	R	V	G	N	Q	L	G	L	R	E	L	N	I	C	T	G	C	G	P	.	G	A	M	E	A	P	M	K	G	A	A	V	G	H	A	Q	Q	R	Y	K	D	S	R	F	I	G	M	T	E	P	S	I	I	A	A	E	P	P
Query Conservation														.	.																												.
Alig confidence														.	.																												.												.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.
Template Sequence		R	K	I	C	V	F	C	G	S	H	S	G	H	R	E	V	F	S	D	A	A	I	E	L	G	N	E	L	V	K	R	K	I	D	L	V	Y	G	G	G	S	V	G	L	X	G	L	I	S	R	R	V	Y	.	.	.	.	.	.	.	E	G	G	L	H	V	L	G	I	I	P	K	A	L	X	P	I	E	I	S
Template Known Secondary structure		S								S				S	S																	T	T									S	S												.	.	.	.	.	.	.			S	S							B	G	G	G
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.								.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	L	V	N	E	L	I	I	M	P	D	I	E	K	R	L	E	A	F	V	R	I	A	H	G	I	I	I	F	P	G	G	V	G	T	A	E	E	L	L	Y	L	L	G	I	L	M	N	P	A	N	K	D	Q	V	L	P	L	I	L	T	G	P	K	E	S	A	D	Y	F	R	V	L	D	E	F	V	V	H
Query Conservation
Alig confidence																																																		.	.
Template Conservation																																																		.	.
Template Sequence		G	E	T	V	G	D	V	R	V	V	A	D	X	H	E	R	K	A	A	X	A	Q	E	A	E	A	F	I	A	L	P	G	G	Y	G	T	X	E	E	L	L	E	X	I	T	W	S	Q	.	.	L	G	I	H	K	K	T	V	G	L	L	N	V	D	G	Y	Y	N	N	L	L	A	L	F	D	T	G	V	E	E
Template Known Secondary structure		S	S			S					B	S	S											T		S	B					S		S																.	.		T	S										G	G	G	T	T
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	G	E	N	A	R	R	H	Y	R	I	I	I	D	D	A	A	E	V	A	R	Q	M	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	I	K	P	G	A	R	N	I	V	V	S	A	P	T	A	K	E	L	X	E	K	X	E	E
Template Known Secondary structure		T	S	S		T	T	G	G	G	G					S	S										S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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