Job Description P09169 Confidence 95.22% Date Thu Jan 5 11:02:08 GMT 2012 Rank 21 Aligned Residues 208 % Identity 13% Template d1uynx_ SCOP info Transmembrane beta-barrels Autotransporter Autotransporter Resolution 2.60

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	N	I	N	A	D	I	S	L	G	T	L	S	G	K	T	K	E	R	V	Y	L	A	E	E	G	G	R	K	V	S	Q	L	D	W	K	F	N	N	A	A	I	I	K	G	A	I	N	W	D	L	M	P	Q	I	S	I	G	A	A	G	W	T	T	L	G	S	R	G	G	N	M	V	D	Q	D	W	M	D
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Sequence		G	E	N	T	T	A	A	A	T	L	G	M	G	R	S	T	W	S	E	N	S	A	N	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	S	I	S	L	F	A	G	I	R	H	D	A	G	D	I	G	Y	L	.	.	K	G	L	F	S	Y	G	R	Y	K	N	S	I	S	R	S	T	G	A	D
Template Known Secondary structure			T	T																	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.															T	T	T				.	.																		S	S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template SS confidence
		855	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.														880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.			900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	N	P	G	T	W	T	D	E	S	R	H	P	D	T	Q	L	N	Y	A	N	E	F	D	L	N	I	K	G	W	L	L	N	E	P	N	Y	R	L	G	L	M	A	G	Y	Q	E	S	R	Y	S	F	T	A	R	G	G	S	Y	I	Y	S	S	E	E	G	F	R	D	D	I	G	S	F	P	N	G	E	R
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.											.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.											.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	H	A	E	G	S	V	N	G	T	L	M	.	.	.	.	.	.	.	.	.	.	Q	L	G	A	L	G	G	V	N	V	.	.	.	P	T	G	D	L	T	V	E	G	G	L	R	Y	D	L	L	K	Q	D	A	F	A	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	A	L
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.											.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.											.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		920	.	.	.	.	.	.	.	.	.	930	.											.	.	.	.	.	.	.	.	940	.				.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.																		.	.	.	.
		189	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure								.																.
Query SS confidence								.																.
Query Sequence		A	I	G	Y	K	Q	.	R	F	K	M	P	Y	I	G	L	T	G	S	Y	R	Y	.	E	D	F	E	L	G	G	T	F	K	Y	S	G	W	V	E	S	S	D	N	D	E	H	Y	D	P	G	K	R	I	T	Y	R	S	K	V	K	D	Q	N	Y	Y	S	V	A	V	N	A	G	Y	Y	V	T	P	N	A	K
Query Conservation								.																.
Alig confidence								.																.																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	W	S	G	N	S	L	T	E	G	T	L	V	G	L	A	G	L	K	L	S	Q	P	L	S	D	K	A	V	L	F	A	T	A	G	V	E	R	D	L	N	G	R	D	Y	T	V	T	G	P	H	T	R	.	.	.	.	.	.	.	.	.	.	.	L	V	A	G	L	G	A	D	V	E	F	G	N	G	W	N
Template Known Secondary structure																										S	S	S													S	S													.	.	.	.	.	.	.	.	.	.	.													T	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		973	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.												.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	V	E	G	A	W	N	R	V	T	N	K	K	G	N	T	S	L	Y	D	H	N	N	N	T	S	D	Y	S	K	N	G	A	G	I	E	N	Y	N	F	I	T	T	A	G	L	K	Y	T	F
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	A	R	Y	S	Y	A	G	S	K	Q	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	S	G	R	V	G	V	G	Y	R	F
Template Known Secondary structure												T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1059	1060	.	.	.	.	.	.	.	.	.	1070	.	.																										.	.	.	.	.	.	.	1080	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions