Job Description P09169 Confidence 93.34% Date Thu Jan 5 11:02:08 GMT 2012 Rank 26 Aligned Residues 104 % Identity 18% Template c3dzmB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:hypothetical conserved protein; PDBTitle: crystal structure of a major outer membrane protein from thermus2 thermophilus hb27 Resolution 2.80 Å

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		210	.	.	.	.	.	.	.	.	.	220	.															.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		E	D	F	E	L	G	G	T	F	K	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	W	V	E	S	S	D	N	D	.	E	H	Y	D	P	G	K	R	I	T	Y	R	S	K	V	K	D	Q	N	Y	Y	S	V	A	V	N	A	G	Y	Y	V	T	P	N	A	K	V	Y	V	E	G	A	W	N
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.										.												.	.	.
Template Conservation																																																	.	.	.
Template Sequence		Q	N	V	T	L	S	L	D	V	L	Y	K	P	L	P	V	E	V	A	P	Y	F	G	V	R	Y	N	F	F	S	G	G	Y	T	D	P	E	D	N	L	T	I	K	A	Q	T	I	.	.	.	S	S	N	Q	L	G	L	G	L	G	V	R	A	A	Y	P	L	M	P	N	L	S	L	V	G	D	L	G	V	D
Template Known Secondary structure																	S																					S	S	S	S	S	S						.	.	.																			T	T
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.													.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	T	N	K	K	G	N	T	S	L	Y	D	H	N	N	N	T	S	D	Y	S	K	N	G	A	G	I	E	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	N	F	I	T	T	A	G	L	K	Y	T	F
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.
Template Sequence		Y	Y	F	Q	A	.	C	F	T	R	V	E	E	D	D	S	G	N	K	S	Q	S	S	V	C	P	G	D	S	G	Y	E	D	V	N	K	F	V	T	Q	P	E	W	V	L	K	L	R	L	G	A	A	Y	R	F
Template Known Secondary structure							.									T	T										T	T	S	T	T								B				S
Template Predicted Secondary structure							.
Template SS confidence
		154	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions