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Job DescriptionP05042
Confidence100.00%DateThu Jan 5 10:58:37 GMT 2012
Rank14Aligned Residues413
% Identity20%Templated1tj7a_
SCOP infoL-aspartase-like L-aspartase-like L-aspartase/fumarase
Resolution2.44

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21.. ......30.........40.........50.........60.........70.........80.........90......
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Query Sequence  LWG. . . . AQTQRSLEHFRISTEKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQT
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Template Sequence  LWGGRFTQAADQRFKQFNDSLR. FDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEEALNVLLEDVRARPQQIL. . . .
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TT
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.GGGTTSS

GGGGG....
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   3......10.........20.... .....30.........40.........50.........60.........70.......
 
   97..100.........110.........120.........130.........140.........150.........160.........170......
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Query Sequence  GSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLNEKSR
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Template Sequence  . . . ESDAEDIHSWVEGKLIDKVG. . . . . . . . . QLGKKLHTGRSRNDQVATDLKLWCKDTVSE. LLTANRQLQSALVETAQ
Template Known Secondary structure  ...GS

SSG.........GGGGGTTTT

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   78.80.........90....... ..100.........110.........120....... ..130.........140....
 
   177..180.........190.........200.........210.........220.........230.. .......240.........250.....
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Query Sequence  AFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAV. GTGLNTHPEYARRVADELAVITC
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Template Sequence  NNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDR. . . . . . . EQLAGWLG
Template Known Secondary structure  TTTT
TT

B
TT
TTTT

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   145....150.........160.........170.........180.........190.........200......... 210.......
 
   256...260.........270.........280.........290.........300.........310.. .......320.........330....
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Query Sequence  APFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIP. ENEPGSSIMPGKVNPTQCEALT
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Template Sequence  FA. SATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDLIFFNT. . . GEAGFVELSDRVTSGSSLMPQKKNPDALELIR
Template Known Secondary structure 
S.SB
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TS...TTT



GGG
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   218. 220.........230.........240.........250.........260. ........270.........280.........290...
 
   335....340.........350.........360.........370.........380.........390.........400.........410....
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Query Sequence  MLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNT
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Template Sequence  GKCGRVQGALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDTWLDCLHMAAL. VLDGIQVKRPRCQEAAQQGYANATELAD
Template Known Secondary structure  TTT

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GGGGG.TT

TSTTTT
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   294.....300.........310.........320.........330.........340.... .....350.........360.........370..
 
   415. ...420.........430.........440.. .......450.........460 ...
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Query Sequence  HI. . . . . . . . . GYDKAAEIAKKAHKEGLTLKAAALAL. . . . GYLSEAEFDSWVRPEQMV. . . . . . . GSM
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Template Sequence  YLVAKGVPFREAHHIVGEAVVEAIRQGKPLEDLPLSELQKFSQVIDEDVYPILSLQSCLDKRAAKGGVS
Template Known Secondary structure  TT

T

GGGS
TTT
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   373......380.........390.........400.........410.........420.........430.........440.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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