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Job DescriptionP05042
Confidence100.00%DateThu Jan 5 10:58:37 GMT 2012
Rank15Aligned Residues404
% Identity24%Templated1re5a_
SCOP infoL-aspartase-like L-aspartase-like L-aspartase/fumarase
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70.........80.........90........
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Query Sequence  DKLWGAQTQRSLEHFRISTEKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGS
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Template Sequence  DAYFTAPAMREI. . . . . . . . FSDRGRLQGMLDFEAALARAEASAGLVPHSAVAAIEAACQ. . . . . . . AERYDTGALANAI
Template Known Secondary structure  S
........TSTTTSS


.......GGGS
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   7..10........ .20.........30.........40.........50........ .60.........70.
 
   99100.........110.........120.........130.........140.........150.........160.........170........
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Query Sequence  GTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLNEKSRAF
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Template Sequence  ATAGNSAIPLVKALGKVIATGVP. . . . . . . EAERYVHLGATSQDAMDTGLVLQLRDALDL. IEADLGKLADTLSQQALKH
Template Known Secondary structure  SSS
G.......GGGGGTTTT

.T
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   72.......80.........90.... .....100.........110.........120.... .....130.........140...
 
   179180.........190.........200.........210.........220.........230.........240.........250........
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Query Sequence  ADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGTGLNTHPEYARRVADELAVITCAPF
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Template Sequence  ADTPLVGRTWLQHATPVTLGMKLAGVLGALTRHRQRLQELRPRLLVLQFGG. ASGSLAALGSKA. MPVAEALAEQLKLT.
Template Known Secondary structure  TT
TTSB




.TTSS
GGGGGG.T
B.
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   144.....150.........160.........170.........180.........190.... .....200...... ...210.........220
 
   259260.........270.........280.........290.........300.........310.........320.........330........
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Query Sequence  VTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPENEPGSSIMPGKVNPTQCEALTMLCC
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Template Sequence  . . . LPEQPWHTQRDRLVEFASVLGLVAGSLGKFGRDISLLMQTEAGEV. . . . . . . . . . FEPSAP. KRNPVGAAVLIGAAT
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   221........230.........240.........250.........260..... ....270. ........280......
 
   339340.........350.........360.........370.........380.........390.........400......... 410..
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Query Sequence  QVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLV. . . . . . TAL
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Template Sequence  RVPGLLSTL. FAAMPQEHERSLGLWHAEWETLPDICCLVSGALRQAQVIAEGMEVDAARMRRNLDLTQGLVLAEAVSIVL
Template Known Secondary structure  .T



TT

SSTTTT

TTSTTGGG
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   297..300..... ....310.........320.........330.........340.........350.........360.........370.....
 
   413.... ..420.........430.........440. ........450.........460...
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Query Sequence  NTHIG. . . . YDKAAEIAKKAHKEGLTLKAAALA. . . . LGYLSEAEFDSWVRPEQMVGSM
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Template Sequence  AQRLGRDRAHHLLEQCCQRAVAEQRHLRAVLGDEPQVSAELSGEELDRLLDPAHYLGQA
Template Known Secondary structure  S
TT

T
S
T
GGG

TT
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   376...380.........390.........400.........410.........420.........430....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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