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Job DescriptionP05042
Confidence100.00%DateThu Jan 5 10:58:37 GMT 2012
Rank11Aligned Residues410
% Identity41%Templated1jswc_
SCOP infoL-aspartase-like L-aspartase-like L-aspartase/fumarase
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKM. . PTSLIHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVL
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Template Sequence  IRIEEDLLGTREVPADAYYGVHTLRAIENFYISNNKISDIPEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVL
Template Known Secondary structure 


BTTB


TT

S




S
BS

SSSTTT
S
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  . AGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQL
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Template Sequence  NNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSLIK. L
Template Known Secondary structure  TTT
STT



BSS

TTTTTT

STT

SS





STT

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   85....90.........100.........110.........120.........130.........140.........150.........160.. .
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  IPQLKTLTQTLNEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGTGLNTHP
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Template Sequence  VDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNIQRTAELLLEVNLGATAIGTGLNTPK
Template Known Secondary structure  TT
TTGGGS
SS

SSSS
SS

S
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   241........250.........260.........270.........280.........290.........300.........310.........320
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Query Sequence  EYARRVADELAVITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPENEPGSSI
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Template Sequence  EYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSI
Template Known Secondary structure  SSS


S
SSSSSS

B
SSSSS
B

B



S


TT
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   244.....250.........260.........270.........280.........290.........300.........310.........320...
 
   321........330.........340.........350.........360.........370.........380.........390.........400
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Query Sequence  MPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQ
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Template Sequence  MPAKVNPVVPEVVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCINGITANKEVCEG
Template Known Secondary structure  S





TT

BTTB
TTTGGG
B

T
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   324.....330.........340.........350.........360.........370.........380.........390.........400...
 
   401........410....
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Query Sequence  LLNESLMLVTALNT
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Template Sequence  YVYNSIGIVTYLNP
Template Known Secondary structure  S
TTGGGT


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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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