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Job DescriptionP05042
Confidence100.00%DateThu Jan 5 10:58:37 GMT 2012
Rank1Aligned Residues462
% Identity41%Templated1j3ua_
SCOP infoL-aspartase-like L-aspartase-like L-aspartase/fumarase
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  VRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAG
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Template Conservation   
 
 
  
   

    

  
 

   
   
       
 
   

 
 
 
    
 
    
  
  
  

   
Template Sequence  VRIEKDFLGEKEIPKDAYYGVQTIRATENFPITGYRIHPELIKSLGIVKKSAALANMEVGLLDKEVGQYIVKAADEVIEG
Template Known Secondary structure 

TT

TT





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TT
S
TT
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  QHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLIPQ
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Template Conservation       
       
 

     
 



  
                   

 
 



   

  
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Template Sequence  KWNDQFIVDPIQGGAGTSINMNANEVIANRALELMGEEKGNYSKISPNSHVNMSQSTNDAFPTATHIA. VLSLLNQLIET
Template Known Secondary structure  S
GGG

S
SS
SGGGTT

TT
TTTS





TTT

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   85....90.........100.........110.........120.........130.........140.........150.. .......160...
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  LKTLTQTLNEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGTGLNTHPEYA
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Template Conservation 
  
   
   
    



 



 
 
 
 


   
     
 
   

           







         
Template Sequence  TKYMQQEFMKKADEFAGVIKMGRTHLQDAVPILLGQEFEAYARVIARDIERIANTRNNLYDINMGATAVGTGLNADPEYI
Template Known Secondary structure  TTT
TTTTGGGS
TT
TTTSS
TT

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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
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Query Sequence  RRVADELAVITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPENEPGSSIMPG
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Template Conservation    
   

  


              

   
    

 

  
 


 

  
 
 
  
  

  
    


 

 
Template Sequence  SIVTEHLAKFSGHPLRSAQHLVDATQNTDCYTEVSSALKVCMINMSKIANDLRLMASGPRAGLSEIVLPARQPGSSIMPG
Template Known Secondary structure 
S


SS

T

STTS






S


SS
TT
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   244.....250.........260.........270.........280.........290.........300.........310.........320...
 
   324.....330.........340.........350.........360.........370.........380.........390.........400...
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Query Sequence  KVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLN
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Template Sequence  KVNPVMPEVMNQVAFQVFGNDLTITSASEAGQFELNVMEPVLFFNLIQSISIMTNVFKSFTENCLKGIKANEERMKEYVE
Template Known Secondary structure 



T
BTTB
TTTTGGG

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   324.....330.........340.........350.........360.........370.........380.........390.........400...
 
   404.....410.........420.........430.........440.........450.........460......
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Query Sequence  ESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEFDSWVRPEQMVGSMKAG
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Template Sequence  KSIGIITAINPHVGYETAAKLAREAYLTGESIRELCIKYGVLTEEQLNEILNPYEMIHPGIAG
Template Known Secondary structure  T
TTGGGGTGGGSTTTTS


TT
SS
S
TTGGGS




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   404.....410.........420.........430.........440.........450.........460......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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