Return to main results Retrieve Phyre Job Id

Job DescriptionP05042
Confidence100.00%DateThu Jan 5 10:58:37 GMT 2012
Rank19Aligned Residues411
% Identity21%Templated1i0aa_
SCOP infoL-aspartase-like L-aspartase-like L-aspartase/fumarase
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70.........80.........90.........100
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  LWGAQTQRSLEHFRISTEKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGT
Query Conservation    
  
 

   
           
 
   

 
 
 
    
 
    
  
  
  

        
       
 

Alig confidence 

















.






















































......
Template Conservation 
              
  . 
  
    
 

 
 
  
   


    
  
  

  
              ......
Template Sequence  RFVGSVDPIMEILSSSIS. TEQRLTEVDIQASMAYAKALEKASILTKTELEKILSGLEKISEESSKGVLVMTQS. . . . . .
Template Known Secondary structure 



S

GGGGGGS

.GGGTTSS
TT




TT......
Template Predicted Secondary structure 






.

















......
Template SS confidence 















































































   12.......20......... 30.........40.........50.........60.........70.........80....
 
   101........110.........120.........130.........140.........150.........160.........170.........180
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  QSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLNEKSRAFAD
Query Conservation     

  


   
    
   
     

   

 
 



   

  
         
   
  
   
  

    
Alig confidence  ..
















.........





























.




















Template Conservation  ..  

   

  
    
.........     

 
 




  

  
 

 

  .
   
  
   
   
     
Template Sequence  . . DEDIQTAIERRLKELIG. . . . . . . . . DIAGKLQTGRSRNEQVVTDLKLLLKSSISV. ISTHLLQLIKTLVERAAIEID
Template Known Secondary structure  ..S
S
.........GGGGGGGTT

.TTT
Template Predicted Secondary structure  ..




.........




.


Template SS confidence 















































































   85....90.........100. ........110.........120.........130. ........140.........150..
 
   181........190.........200.........210.........220.........230. ........240.........250.........
Predicted Secondary structure 


















.













Query SS confidence 


















































.



























Query Sequence  IVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTA. VGTGLNTHPEYARRVADELAVITCAPFV
Query Conservation 
 
 



 
 
 




   
     
 
   

     

    


 
.


           
   

  


   
Alig confidence 


















































.








.......









.
Template Conservation 
 
 



 
 
 
 
 
  
      
 
   

           

  
  

    

.......   
  


 . 
Template Sequence  IIMPGYTHLQKALPIRWSQFLLSHAVALTRDSERLGEVKKRITVLPLGSGVLAGNPLEIDR. . . . . . . ELLRSELDMT. S
Template Known Secondary structure 
TTT

S
TTTT

SS


.......T
S.
Template Predicted Secondary structure 

























.......


.
Template SS confidence 















































































   153......160.........170.........180.........190.........200.........210... ......220... .
 
   260.........270.........280.........290.........300.........310.. .......320.........330........
Predicted Secondary structure 














.














Query SS confidence 




















































.

























Query Sequence  TAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIP. ENEPGSSIMPGKVNPTQCEALTMLCC
Query Conservation     
       

   
    

 

  
 


 

 

 
    
 


  
.    


 

 




  
 
   
 
Alig confidence 








































...








.

























Template Conservation      
      

   
    
  
   
 


 

    
... 
 
 
        


 

 



   
 

  
 
Template Sequence  ITLNSIDAISERDFVVELISVATLLMIHLSKLAEDLIIFST. . . TEFGFVTLSDAYSTGSSLLPQKKNPDSLELIRSKAG
Template Known Secondary structure 
S


TS...TTT
S

GGG

SS
TT

Template Predicted Secondary structure 












...




















Template SS confidence 















































































   225....230.........240.........250.........260..... ....270.........280.........290.........300.
 
   339340.........350.........360.........370.........380.........390.........400.........410......
Predicted Secondary structure 
















..
Query SS confidence 













































































. .
Query Sequence  QVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHI. .
Query Conservation   
 
              
 
          
     
  
        
 

 

 


   
  
  
 



  
..
Alig confidence 














































.



















.








..
Template Conservation     
                  
       
          
     . 
  
 
  


        . 

 

  
  
Template Sequence  RVFGRLAAILMVLKGIPSTFSKDLQEDKEAVLDVVDTLTAVLQVATG. VISTLQINKENMEKALTPEL. LSTDLALYLVR
Template Known Secondary structure  TT

SS

GGGGG.

T

GGG.G
Template Predicted Secondary structure 










.







.
Template SS confidence 















































































   302.......310.........320.........330.........340........ .350.........360........ .370.........
 
   417..420.........430.........440. ........450.........460 ...
Predicted Secondary structure  .......



....







.......


Query SS confidence  . . . . . . .
























. . . .


















. . . . . . .


Query Sequence  . . . . . . . GYDKAAEIAKKAHKEGLTLKAAALA. . . . LGYLSEAEFDSWVRPEQMV. . . . . . . GSM
Query Conservation  .......
   
  

  
   
  
 
    ....   
  
 
   


   
.......
  
Alig confidence  .......
























....


















.......


Template Conservation   
   
 

  
   
  
   
                
   

   


   
  
   

 
Template Sequence  KGMPIRQAQTASGKAVHLAETKGITINNLTLEDLKSISPLFASDVSQVFSVVNSVEQYTAVGGTA
Template Known Secondary structure  TT

TTS
GGG

TT
TT

GGGGGGS
TT

STTSSS
Template Predicted Secondary structure 





















Template SS confidence 
































































   380.........390.........400.........410.........420.........430.........440....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions