Return to main results Retrieve Phyre Job Id

Job DescriptionP05042
Confidence100.00%DateThu Jan 5 10:58:37 GMT 2012
Rank21Aligned Residues391
% Identity20%Templated1hy0a_
SCOP infoL-aspartase-like L-aspartase-like L-aspartase/fumarase
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70.........80.........90.........100.........110.........120.
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  TSLIHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGV
Query Conservation     
 
   

 
 
 
    
 
    
  
  
  

        
       
 

   

  


   
    
  
Alig confidence 






















































........














..
Template Conservation    
    
    
 
  
   


    
  
  

  
                ........

   

  
    
..
Template Sequence  QRLSEVDIQASIAYAKALEKAGILTKTELEKILSGLEKISEELSKGVIVVTQSDE. . . . . . . . DIQTANERRLKELIG. .
Template Known Secondary structure  TTTSS
TT




TTSS........SG..
Template Predicted Secondary structure 



















........



..
Template SS confidence 















































































   32.......40.........50.........60.........70.........80...... ...90.........100.
 
   122.......130.........140.........150.........160.........170.........180.........190.........200.
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  RGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLNEKSRAFADIVKIGRTHLQDATPLTLGQEI
Query Conservation   
     

   

 
 



   

  
         
   
  
   
  

    

 
 



 
 
 




   
Alig confidence  .......





























.









































Template Conservation  .......     

 
 




  

  
  
  
  .
   
  
   
   
       
 



 
 
 
 
 
   
Template Sequence  . . . . . . . DIAGKLHTGRSRNEQVVTDLKLFMKNSLSI. ISTHLLQLIKTLVERAAIEIDVILPGYTHLQKAQPIRWSQFL
Template Known Secondary structure  .......GGGGGGGTT

.TTT
TT
Template Predicted Secondary structure  .......



.










Template SS confidence 















































































   102.......110.........120.........130. ........140.........150.........160.........170...
 
   202.......210.........220.........230. ........240.........250.........260.........270.........280
Predicted Secondary structure 







.




















Query SS confidence 





























.
















































Query Sequence  SGWVAMLEHNLKHIEYSLPHVAELALGGTA. VGTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQAHGA
Query Conservation 
     
 
   

     

    


 
.


           
   

  


      
       

   
    
Alig confidence 





























.








.......









.





















Template Conservation        
 
   

           

 

  

    

.......   
  


 .    

      

   
    
Template Sequence  LSHAVALTRDSERLGEVKKRINVLPLGSGALAGNPLDIDR. . . . . . . EMLRSELEFA. SISLNSMDAISERDFVVEFLSV
Template Known Secondary structure  T
TT
TTTT

SS


.......T
S.
S


Template Predicted Secondary structure 














.......


.












Template SS confidence 















































































   174.....180.........190.........200.........210... ......220... ......230.........240.....
 
   281........290.........300.........310.. .......320.........330.........340.........350.........
Predicted Secondary structure 







.






















Query SS confidence 































.














































Query Sequence  LKGLAASLMKIANDVRWLASGPRCGIGEISIP. ENEPGSSIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELN
Query Conservation 

 

  
 


 

 

 
    
 


  
.    


 

 




  
 
   
  
 
              
 
Alig confidence 



















...








.














































Template Conservation 
      
 


 

    
... 
 


        


 

 



   
 

  
    
                 
Template Sequence  ATLLLIHLSKMAEDLIIYST. . . SEFGFLTLSDAFSTGSSLMPQKKNPDSLELIRSKSGRVFGRLASILMVLKGLPSTYN
Template Known Secondary structure  TS...TTT
S

GGG
B

SS
TT

B
TT

SS

Template Predicted Secondary structure 
...
























Template SS confidence 















































































   246...250.........260..... ....270.........280.........290.........300.........310.........320..
 
   360.........370.........380.........390.........400.........410...... ...420.........430
Predicted Secondary structure 








.........
Query SS confidence 
























































. . . . . . . . .













Query Sequence  VFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHI. . . . . . . . . GYDKAAEIAKKAHK
Query Conservation            
     
  
        
 

 

 


   
  
  
 



  
.........
   
  

  
  
Alig confidence 

























.


















.









.........













Template Conservation   
       
          
     . 
  
 
   

   
   .  

 

  

  

  
 

  
   
  
  
Template Sequence  KDLQEDKEAVIDVVDTLTAVLQVATG. VISTLQISKENMEKALTPE. MLATDLALYLVRKGMPFRQAHTASGKAVHLAET
Template Known Secondary structure  GGGGG.



GG.GGTT

Template Predicted Secondary structure  .






.




Template SS confidence 















































































   323......330.........340........ .350.........360....... ..370.........380.........390.........400
 
   431........440. ........450.........460 ...
Predicted Secondary structure 



....







.......


Query SS confidence 










. . . .


















. . . . . . .


Query Sequence  EGLTLKAAALA. . . . LGYLSEAEFDSWVRPEQMV. . . . . . . GSM
Query Conservation   
  
 
    ....   
  
 
   


   
.......
  
Alig confidence 










....


















.......


Template Conservation   
  
             
    
   


   
  
   

 
Template Sequence  KGIAINNLTLEDLKSISPLFSSDVSQVFNFVNSVEQYTALGGTA
Template Known Secondary structure  TS
TTTS
TT
TT

GGGGGGS
T

STTSSS
Template Predicted Secondary structure 

















Template SS confidence 











































   401........410.........420.........430.........440....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions