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Job DescriptionP05042
Confidence100.00%DateThu Jan 5 10:58:37 GMT 2012
Rank7Aligned Residues448
% Identity48%Templatec3no9C_
PDB info PDB header:lyaseChain: C: PDB Molecule:fumarate hydratase class ii; PDBTitle: crystal structure of apo fumarate hydratase from mycobacterium2 tuberculosis
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  NTVRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVL
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Template Sequence  ANYRIEHDTMGEVRVPAKALWRAQTQRAVENFPISGRGLERTQIRALGLLKGACAQVNSDLGLLAPEKADAIIAAAAEIA
Template Known Secondary structure  TTB


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   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  AGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLI
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Template Sequence  DGQHDDQFPIDVFQTGSGTSSNMNTNEVIASIAAK. . . . . . . GGVTLHPNDDVNMSQSSNDTFPTATHIAATEAAVAHLI
Template Known Secondary structure  TTTTTTS



SSS
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TTT

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   88.90.........100.........110.........120.. .......130.........140.........150.........160
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  PQLKTLTQTLNEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGTGLNTHPE
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Template Sequence  PALQQLHDALAAKALDWHTVVKSGRTHLMDAVPVTLGQEFSGYARQIEAGIERVRACLPRLGELAIGGTAVGTGLNAPDD
Template Known Secondary structure  TTT
TTTTT
TT
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TTS
TT
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   242.......250...... ...260.........270.........280.........290.........300.........310.........320
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Query Sequence  YARRVADELAVITCA. PFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPENEPGSSI
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Template Sequence  FGVRVVAVLVAQTGLSELRTAANSFEAQAARDGLVEASGALRTIAVSLTKIANDIRWMGSGPLTGLAEIQ. . . . . . LPDL
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   241........250.........260.........270.........280.........290.........300.........310 ....
 
   321........330.........340.........350.........360.........370.........380.........390.........400
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Query Sequence  MPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQ
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Template Sequence  QPGKVNPVLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRCIAGLTANVEHLRR
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   315....320.........330.........340.........350.........360.........370.........380.........390....
 
   401........410.........420.........430.........440.... .....450.........460..
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Query Sequence  LLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGY. . . LSEAEFDSWVRPEQMVGS
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Template Sequence  LAESSPSIVTPLNSAIGYEEAAAVAKQALKERKTIRQTVIDRGLIGDLSIEDLDRRLDVLAMAKA
Template Known Secondary structure  TT
GGG
SGGGGTS
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   401........410.........420.........430.........440.........450.........460.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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