Job Description P05042 Confidence 5.67% Date Thu Jan 5 10:58:37 GMT 2012 Rank 93 Aligned Residues 71 % Identity 13% Template c3iymA_ PDB info PDB header:virus Chain: A: PDB Molecule:capsid protein; PDBTitle: backbone trace of the capsid protein dimer of a fungal partitivirus2 from electron cryomicroscopy and homology modeling Resolution 4.70 Å

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		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.												.
Query SS confidence																																																		.												.
Query Sequence		N	L	K	H	I	E	Y	S	L	P	H	V	A	E	L	A	L	G	G	T	A	V	G	T	G	L	N	T	H	P	E	Y	A	R	R	V	A	D	E	L	A	V	I	T	C	A	P	F	.	V	T	A	P	N	K	F	E	A	L	A	.	T	C	D	A	L	V	Q	A	H	G	A	L	K	G	L	A	A	S	L
Query Conservation																																																		.												.
Alig confidence																																.	.	.	.	.	.	.	.	.	.									.												.
Template Conservation																																.	.	.	.	.	.	.	.	.	.
Template Sequence		R	R	D	R	F	D	F	L	F	K	S	Y	A	D	V	G	Q	F	T	T	A	F	T	T	Q	A	A	S	D	V	.	.	.	.	.	.	.	.	.	.	L	T	E	L	G	L	P	W	N	S	P	S	A	G	H	L	N	W	Q	Y	S	T	K	Q	R	F	T	F	L	A	D	T	W	A	K	L	S	A	A	Y
Template Known Secondary structure											T	S	T	T	G	G	G	T	T	T	S	S				T					T	.	.	.	.	.	.	.	.	.	.							G	G	G	T	T								T	T	T	T	T					T	T					T	T	T	G	G	G	G
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.											.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		289	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	F
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		348	.	350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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