Job Description P05042 Confidence 100.00% Date Thu Jan 5 10:58:37 GMT 2012 Rank 10 Aligned Residues 400 % Identity 56% Template c3gtdB_ PDB info PDB header:lyase Chain: B: PDB Molecule:fumarate hydratase class ii; PDBTitle: 2.4 angstrom crystal structure of fumarate hydratase from rickettsia2 prowazekii Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	R	S	E	K	D	S	M	G	A	I	D	V	P	A	D	K	L	W	G	A	Q	T	Q	R	S	L	E	H	F	R	I	S	T	E	K	M	P	T	S	L	I	H	A	L	A	L	T	K	R	A	A	A	K	V	N	E	D	L	G	L	L	S	E	E	K	A	S	A	I	R	Q	A	A	D	E	V	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Y	R	I	E	S	D	S	F	G	E	I	Q	I	E	E	K	F	Y	W	G	A	Q	T	Q	R	S	L	N	N	F	K	I	S	K	Q	K	M	P	K	I	L	I	R	A	L	A	I	L	K	K	C	A	A	Q	V	N	Y	E	F	G	D	L	E	Y	K	I	A	T	S	I	D	K	A	I	D	R	I	L	A
Template Known Secondary structure									T	T							T	T																		S		B																							T	T		S																	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	H	D	D	E	F	P	L	A	I	W	Q	T	G	S	G	T	Q	S	N	M	N	M	N	E	V	L	A	N	R	A	S	E	L	L	G	G	V	R	G	M	E	R	K	V	H	P	N	D	D	V	N	K	S	Q	S	S	N	D	V	F	P	T	A	M	H	V	A	A	L	L	A	L	R	K	Q	L	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	F	E	D	N	F	P	L	V	V	W	Q	T	G	S	G	T	Q	T	N	M	N	M	N	E	V	I	A	S	I	A	N	E	E	L	T	G	K	K	G	G	K	F	P	V	H	P	N	D	H	V	N	K	G	Q	S	S	N	D	S	F	P	T	A	M	H	I	A	T	V	L	A	T	K	Q	Q	L	I	P
Template Known Secondary structure		T	T	T	G	G	G				B	S	S	S		T	T																						S	S		S	S	S	S	S	S							T	T	T																						T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	K	T	L	T	Q	T	L	N	E	K	S	R	A	F	A	D	I	V	K	I	G	R	T	H	L	Q	D	A	T	P	L	T	L	G	Q	E	I	S	G	W	V	A	M	L	E	H	N	L	K	H	I	E	Y	S	L	P	H	V	A	E	L	A	L	G	G	T	A	V	G	T	G	L	N	T	H	P	E	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	N	N	L	L	T	Y	L	Q	D	K	S	K	D	W	D	K	I	I	K	I	G	R	T	H	L	Q	D	A	T	P	L	T	L	K	Q	E	F	S	G	Y	I	T	Q	I	E	Y	A	L	E	R	I	E	D	A	L	K	K	V	Y	L	L	A	Q	G	G	T	A	V	G	T	G	I	N	S	K	I	G	F
Template Known Secondary structure															T	T		T	T								T	T																															T	T	T	T				T	T		T	T	T	S	S		T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	R	V	A	D	E	L	A	V	I	T	C	A	P	F	V	T	A	P	N	K	F	E	A	L	A	T	C	D	A	L	V	Q	A	H	G	A	L	K	G	L	A	A	S	L	M	K	I	A	N	D	V	R	W	L	A	S	G	P	R	C	G	I	G	E	I	S	I	P	E	N	E	P	G	S	S	I	M	P
Query Conservation
Alig confidence																																																																								.	.	.	.
Template Conservation																																																																								.	.	.	.
Template Sequence		D	I	K	F	A	Q	K	V	A	E	F	T	Q	Q	P	F	K	T	A	P	N	K	F	E	S	L	A	A	H	D	A	L	V	E	F	S	G	T	L	N	T	I	A	V	S	L	M	K	I	A	N	D	I	R	L	L	G	S	G	P	R	C	G	L	G	E	L	H	L	P	.	.	.	.	E	N	E	P	M	P
Template Known Secondary structure														T	S						S																																					T			S	S	S	S								.	.	.	.						T
Template Predicted Secondary structure																																																																								.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.					.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	V	N	P	T	Q	C	E	A	L	T	M	L	C	C	Q	V	M	G	N	D	V	A	I	N	M	G	G	A	S	G	N	F	E	L	N	V	F	R	P	M	V	I	H	N	F	L	Q	S	V	R	L	L	A	D	G	M	E	S	F	N	K	H	C	A	V	G	I	E	P	N	R	E	R	I	N	Q	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	V	N	P	T	Q	V	E	A	L	T	M	V	C	T	Q	V	M	G	N	H	V	T	V	T	I	A	G	S	N	G	H	L	E	L	N	V	F	K	P	V	I	I	Y	N	I	L	Q	S	I	E	L	L	S	D	S	V	N	S	F	V	T	H	C	V	K	G	L	E	P	N	I	A	R	I	N	T	L	R
Template Known Secondary structure		T																													T	T		B	T	T	B																													T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		403	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	S	L
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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