Job Description P05042 Confidence 100.00% Date Thu Jan 5 10:58:37 GMT 2012 Rank 24 Aligned Residues 425 % Identity 15% Template c3bhgA_ PDB info PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: crystal structure of adenylosuccinate lyase from legionella2 pneumophila Resolution 1.90 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		D	S	M	G	A	I	D	V	P	A	D	K	L	W	G	A	Q	T	Q	R	S	L	E	H	F	R	I	S	T	E	K	M	P	T	S	L	I	H	A	L	A	L	T	K	R	A	A	A	K	V	N	E	D	L	G	L	L	S	E	E	K	A	S	A	I	R	Q	A	A	D	.	E	V	L	A	G	Q	H	D	D
Query Conservation																																																																								.
Alig confidence						.	.	.	.																		.	.	.	.	.	.																																								.
Template Conservation						.	.	.	.																		.	.	.	.	.	.
Template Sequence		N	A	I	S	.	.	.	.	P	I	D	G	R	Y	V	N	K	T	R	A	L	S	P	Y	F	.	.	.	.	.	.	S	E	F	A	L	T	Y	Y	R	L	X	V	E	I	K	W	F	E	S	L	A	A	N	D	T	I	P	E	V	P	A	L	D	N	K	A	R	K	F	L	S	D	L	I	S	N	F	N	E
Template Known Secondary structure		G		S	S	.	.	.	.	T	T	T	T	T	T					G	G	G	T	T	T	S	.	.	.	.	.	.	S																					T		T	T		T	T	S																	T
Template Predicted Secondary structure						.	.	.	.																		.	.	.	.	.	.
Template SS confidence
		7	.	.	10					.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.							.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	P	L	A	I	W	Q	T	G	S	G	T	Q	S	N	M	N	M	N	E	V	L	A	N	R	A	S	E	L	L	G	G	V	R	G	M	E	R	K	V	H	P	N	D	D	V	N	K	S	Q	S	S	N	D	V	F	P	T	A	M	H	V	A	A	L	L	A	L	R	K	Q	L	I	P	Q	L	K	T	L
Query Conservation
Alig confidence																					.	.	.																	.	.	.
Template Conservation																					.	.	.																	.	.	.
Template Sequence		S	E	A	E	K	I	K	E	F	E	K	Q	T	N	H	D	V	K	A	.	.	.	V	E	Y	Y	L	Q	D	K	F	Q	E	N	E	Q	L	K	.	.	.	S	C	V	A	F	I	H	F	A	C	T	S	E	D	I	N	N	L	A	Y	A	L	X	I	K	Q	A	I	A	Q	V	I	Q	P	T	I	A	E	I
Template Known Secondary structure											T	T	T		S	S					.	.	.										T	T	S	T	T	G	G	.	.	.	G	G	G	G	G	T	T	T	T																						T
Template Predicted Secondary structure																					.	.	.																	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	T	L	N	E	K	S	R	A	F	A	D	I	V	K	I	G	R	T	H	L	Q	D	A	T	P	L	T	L	G	Q	E	I	S	G	W	V	A	M	L	E	H	N	L	K	H	I	E	Y	S	L	P	H	V	A	E	L	A	L	G	G	T	A	V	G	T	G	L	N	T	H	P	E	Y	A	R	R	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	G	S	I	T	L	L	G	K	Q	H	A	D	V	A	X	L	S	R	T	H	G	Q	P	A	T	P	T	T	X	G	K	E	L	V	N	F	V	A	R	L	K	R	P	Q	Q	Q	L	A	E	V	L	I	P	A	K	F	N	G	A	V	G	N	Y	N	A	H	V	A	A	Y	P	E	V	D	W	R	K	H	C
Template Known Secondary structure												T	T	T								T	T																																						S	S	S	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	L	A	V	I	T	C	A	P	F	V	T	A	P	N	K	F	E	A	L	A	T	C	D	A	L	V	Q	A	H	G	A	L	K	G	L	A	A	S	L	M	K	I	A	N	D	V	R	W	L	A	S	G	P	R	C	G	I	G	E	I	S	I	P	E	N	E	P	G	S	S	I	M	P	G	K	V	N	P
Query Conservation
Alig confidence																	.	.	.																																									.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.																																									.	.	.	.	.	.	.	.	.
Template Sequence		A	N	F	V	T	S	L	G	L	S	F	N	A	Y	T	.	.	.	T	Q	I	E	P	H	D	G	I	A	E	V	S	Q	I	X	V	R	I	N	N	I	L	L	D	Y	T	Q	D	I	W	S	Y	I	S	L	G	Y	F	K	.	.	.	.	.	.	.	.	.	Q	K	T	S	S	T	X	P	H	K	V	N	P
Template Known Secondary structure								T	T					S	S		.	.	.	S	S	S																																	T	T	S			.	.	.	.	.	.	.	.	.						S	S						T
Template Predicted Secondary structure																	.	.	.																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.										.	.	.	.	290	.	.	.	.	.	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	C	E	A	L	T	M	L	C	C	Q	V	M	G	N	D	V	A	I	N	M	G	G	A	S	G	N	F	E	L	N	V	F	R	P	M	V	I	H	N	F	L	Q	S	V	R	L	L	A	D	G	M	E	S	F	N	K	H	C	A	V	G	I	E	P	N	R	E	R	I	N	Q	L	L	N	E	S	L	M
Query Conservation
Alig confidence																																																												.
Template Conservation																																																												.
Template Sequence		I	D	F	E	N	A	E	G	N	L	G	L	S	N	A	L	F	I	H	F	A	N	K	L	T	Q	S	R	X	Q	R	D	L	S	D	S	T	V	L	R	N	L	G	V	A	F	S	Y	S	L	I	A	Y	H	S	V	A	K	.	G	N	D	K	L	Q	I	N	K	S	A	L	Q	K	D	L	S	E	N	W	E
Template Known Secondary structure																									T	T			S	T	T			T							T	T																		.			T	T														T		G	G
Template Predicted Secondary structure																																																												.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		408	.	410	.	.	.	.	.	.									.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.			.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.																																						.	.
Query SS confidence											.	.	.	.	.	.	.	.																																						.	.
Query Sequence		L	V	T	A	L	N	T	H	I	.	.	.	.	.	.	.	.	G	Y	D	K	A	A	E	I	A	K	K	A	H	K	E	G	L	T	L	K	A	A	A	L	A	L	G	Y	L	S	E	A	E	F	D	S	W	.	.	V	R	P	E	Q	M	V	G	S	M
Query Conservation											.	.	.	.	.	.	.	.																																						.	.
Alig confidence											.	.	.	.	.	.	.	.																												.										.	.
Template Conservation																																														.
Template Sequence		V	L	A	E	A	I	Q	T	V	X	R	R	Y	N	E	P	N	A	Y	E	Q	L	K	E	L	T	R	G	Q	X	I	D	A	E	N	L	K	K	F	I	K	T	L	S	.	I	P	E	E	A	K	A	E	L	X	K	L	T	P	E	T	Y	T	G	L	A
Template Known Secondary structure		G	G											T	T		T	T										T	T	S													T	S		.	S													G	G	G			T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.		.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.