Job Description P05042 Confidence 100.00% Date Thu Jan 5 10:58:37 GMT 2012 Rank 25 Aligned Residues 401 % Identity 17% Template c2vd6B_ PDB info PDB header:lyase Chain: B: PDB Molecule:adenylosuccinate lyase; PDBTitle: human adenylosuccinate lyase in complex with its substrate2 n6-(1,2-dicarboxyethyl)-amp, and its products amp and3 fumarate. Resolution 2.00 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		P	A	D	K	L	W	G	A	Q	T	Q	R	S	L	E	H	F	R	I	S	T	E	K	M	P	T	S	L	I	H	A	L	A	L	T	K	R	A	A	A	K	V	N	E	D	L	G	L	.	L	S	E	E	K	A	S	A	I	R	Q	A	A	D	E	V	L	A	G	Q	H	D	D	E	F	P	L	A	I	W	Q
Query Conservation																																																		.
Alig confidence																.	.	.	.	.	.	.	.																											.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	A	S	R	Y	A	S	P	E	M	C	F	V	.	.	.	.	.	.	.	.	F	S	D	R	Y	K	F	R	T	W	R	Q	L	W	L	W	L	A	E	A	E	Q	T	L	G	L	P	I	T	D	E	Q	I	Q	E	M	K	S	N	L	E	N	.	.	.	.	.	.	.	.	.	.	.	I	D	F	K	M
Template Known Secondary structure						T	T	S								.	.	.	.	.	.	.	.	T	S																						T	T		S												T	S	S		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.									30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.												.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	S	G	T	Q	S	N	M	N	M	N	E	V	L	A	N	R	A	S	E	L	L	G	G	V	R	G	M	E	R	K	V	H	P	N	D	D	V	N	K	S	Q	S	S	N	D	V	F	P	T	A	M	H	V	A	A	L	L	A	L	R	K	Q	L	I	P	Q	L	K	T	L	T	Q	T	L	N	E	K	S
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.																								.
Template Conservation																										.	.	.	.	.	.	.	.	.																								.
Template Sequence		A	A	E	E	E	K	R	L	R	H	D	V	M	A	H	V	H	T	F	G	H	C	C	P	.	.	.	.	.	.	.	.	.	K	A	A	G	I	I	H	L	G	A	T	S	C	Y	V	G	D	N	T	D	L	I	I	.	L	R	N	A	L	D	L	L	L	P	K	L	A	R	V	I	S	R	L	A	D	F	A
Template Known Secondary structure										S															T	.	.	.	.	.	.	.	.	.	T	T	G	G	G	T	T	T	T			T												.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100										.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.							.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.
Query Sequence		R	A	F	A	D	I	V	K	I	G	R	T	H	L	Q	D	A	T	P	L	T	L	G	Q	E	I	S	G	W	V	A	M	L	E	H	N	L	K	H	I	E	Y	S	L	P	H	V	A	E	L	A	L	G	G	T	A	V	G	T	G	.	.	.	.	.	.	L	N	T	H	P	E	Y	A	R	R	V	A	D	E
Query Conservation																																																														.	.	.	.	.	.
Alig confidence																																																								.						.	.	.	.	.	.
Template Conservation																																																								.
Template Sequence		K	E	R	A	S	L	P	T	L	G	F	T	H	F	Q	P	A	Q	L	T	T	V	G	K	R	C	C	L	W	I	Q	D	L	C	M	D	L	Q	N	L	K	R	V	R	D	D	L	R	F	R	G	V	K	G	.	T	T	G	T	Q	A	S	F	L	Q	L	F	E	G	D	D	H	K	V	E	Q	L	D	K	M
Template Known Secondary structure				T	T	T								T	T																																			B			S			.	T	T	S	S								T	T	T
Template Predicted Secondary structure																																																								.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	V	I	T	C	A	P	F	V	T	A	P	N	K	F	E	A	L	A	T	C	D	A	L	V	Q	A	H	G	A	L	K	G	L	A	A	S	L	M	K	I	A	N	D	V	R	W	L	A	S	G	P	R	C	G	I	G	E	I	S	I	P	E	N	E	P	G	S	S	I	M	P	G	K	V	N	P	T	Q
Query Conservation
Alig confidence										.							.																																			.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template Conservation										.							.																																			.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template Sequence		V	T	E	K	A	G	F	K	.	R	A	F	I	I	T	.	G	Q	T	Y	T	R	K	V	D	I	E	V	L	S	V	L	A	S	L	G	A	S	V	H	K	I	C	T	D	I	R	L	L	A	.	.	.	.	.	N	L	K	E	M	E	E	P	.	.	.	.	.	.	.	.	.	F	Y	K	R	N	P	M	R
Template Known Secondary structure						T	T		S	.		B		S			.	S	S	S			T																													.	.	.	.	.		T	T	S					.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.							.																																			.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.		.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.						.	.	.	.	.	.	280	.										.	.	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	A	L	T	M	L	C	C	Q	V	M	G	N	D	V	A	I	N	M	G	G	A	S	G	N	F	E	L	N	V	F	R	P	M	V	I	H	N	F	L	Q	S	V	R	L	L	A	D	G	M	E	S	F	N	K	H	C	A	V	G	I	E	P	N	R	E	R	I	N	Q	L	L	N	E	S	L	M	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	R	C	C	S	L	A	R	H	L	M	T	L	V	M	D	P	L	Q	T	A	S	V	Q	W	F	E	R	T	L	D	D	S	A	N	R	R	I	C	L	A	E	A	F	L	T	A	D	T	I	L	N	T	L	Q	N	I	S	E	G	L	V	V	Y	P	K	V	I	E	R	R	I	R	Q	E	L	P	F	M
Template Known Secondary structure																T									T			T	T			G	G	G																											S	S
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
								410	.	.	.	.	.	.	.		.	.	420	.	.	.	.	.	.	.	.	.	430	.	.											.	.	.	.	.	.	.	440	.	.	.	.	.	.			.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure		.	.	.	.	.	.									.																.	.	.	.	.	.	.	.	.	.															.	.
Query SS confidence		.	.	.	.	.	.									.																.	.	.	.	.	.	.	.	.	.															.	.
Query Sequence		.	.	.	.	.	.	T	A	L	N	T	H	I	G	.	Y	D	K	A	A	E	I	A	K	K	A	H	K	E	G	.	.	.	.	.	.	.	.	.	.	L	T	L	K	A	A	A	L	A	L	G	Y	L	S	.	.	E	A	E	F	D	S	W	V	R	P	E	Q	M	V	G	S	M
Query Conservation		.	.	.	.	.	.									.																.	.	.	.	.	.	.	.	.	.															.	.
Alig confidence		.	.	.	.	.	.									.																.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation
Template Sequence		A	T	E	N	I	I	M	A	M	V	K	A	G	G	S	R	Q	D	C	H	E	K	I	R	V	L	S	Q	Q	A	A	S	V	V	K	Q	E	G	G	D	N	D	L	I	E	R	I	Q	V	D	A	Y	F	S	P	I	H	S	Q	L	D	H	L	L	D	P	S	S	F	T	G	R	A
Template Known Secondary structure													T	T																								S														G	G	G	G	G	G	G	G	G					T		G	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.