Job Description P05042 Confidence 100.00% Date Thu Jan 5 10:58:37 GMT 2012 Rank 26 Aligned Residues 416 % Identity 16% Template c2qgaC_ PDB info PDB header:lyase Chain: C: PDB Molecule:adenylosuccinate lyase; PDBTitle: plasmodium vivax adenylosuccinate lyase pv003765 with amp bound Resolution 2.01 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																		.	.	.	.
Query SS confidence																																																		.	.	.	.
Query Sequence		P	A	D	K	L	W	G	A	Q	T	Q	R	S	L	E	H	F	R	I	S	T	E	K	M	P	T	S	L	I	H	A	L	A	L	T	K	R	A	A	A	K	V	N	E	D	L	G	L	.	.	.	.	L	S	E	E	K	A	S	A	I	R	Q	A	A	D	E	V	L	A	G	Q	H	D	D	E	F	P	L	A
Query Conservation																																																		.	.	.	.
Alig confidence																			.	.	.	.	.	.																										.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.																																															.	.	.	.	.	.	.	.
Template Sequence		P	I	D	G	R	Y	K	K	A	C	G	E	L	S	A	F	F	.	.	.	.	.	.	S	E	H	A	L	I	K	H	R	I	I	V	E	V	R	W	L	L	F	L	N	E	E	E	L	F	F	E	K	V	T	D	H	S	V	E	V	L	N	Q	I	A	T	N	I	T	.	.	.	.	.	.	.	.	D	S	D
Template Known Secondary structure		T	T	T	T	T	T					G	G	G	G	G	T	S	.	.	.	.	.	.	S																							T	S	S	S																				.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.																																															.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.							.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70									.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	W	Q	T	G	S	G	T	Q	S	N	M	N	M	N	E	V	L	A	N	R	A	S	E	L	L	G	G	V	R	G	M	E	R	K	V	H	P	N	D	D	V	N	K	S	Q	S	S	N	D	V	F	P	T	A	M	H	V	A	A	L	L	A	L	R	K	Q	L	I	P	Q	L	K	T	L	T	Q	T	L	N
Query Conservation
Alig confidence																															.
Template Conservation																															.
Template Sequence		I	A	R	V	K	A	I	E	E	E	T	N	H	D	V	K	A	V	E	Y	F	V	K	E	K	L	K	N	S	.	K	R	E	D	L	L	K	I	K	E	Y	V	H	Y	L	C	T	S	E	D	I	N	N	V	A	Y	A	T	C	L	K	A	C	L	N	D	V	V	I	P	C	L	E	K	I	M	L	K	L	K
Template Known Secondary structure													S																T	S	.	S								G	G	G	T	T	T	T																						T
Template Predicted Secondary structure																															.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.
Query Sequence		E	K	S	R	A	F	A	D	I	V	K	I	G	R	T	H	L	Q	D	A	T	P	L	T	L	G	Q	E	I	S	G	W	V	A	M	L	E	H	N	L	K	H	I	E	Y	S	L	P	H	V	A	E	L	A	L	G	G	T	A	V	G	T	G	L	N	T	H	.	.	.	.	.	P	E	Y	A	R	R	V	A
Query Conservation																																																																					.	.	.	.	.
Alig confidence																																																				.	.	.					.										.	.	.	.	.
Template Conservation																																																				.	.	.					.
Template Sequence		D	L	A	V	E	Y	S	H	V	P	L	L	S	R	T	H	G	Q	P	A	S	S	T	T	F	G	K	E	M	A	N	F	Y	A	R	I	H	H	H	V	G	V	I	R	R	V	K	V	C	A	.	.	.	K	F	N	G	.	A	V	G	N	F	N	A	H	K	V	A	S	K	D	T	D	W	V	N	T	I	G
Template Known Secondary structure							T	T	T								T	T																													S					.	.	.					.	T	T	S	S									T	T	S
Template Predicted Secondary structure																																																				.	.	.					.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	L	A	V	I	T	C	A	P	F	V	T	A	P	N	K	F	E	A	L	A	T	C	D	A	L	V	Q	A	H	G	A	L	K	G	L	A	A	S	L	M	K	I	A	N	D	V	R	W	L	A	S	G	P	R	C	G	I	G	E	I	S	I	P	E	N	E	P	G	S	S	I	M	P	G	K	V	N	P
Query Conservation
Alig confidence																	.	.	.																																				.	.	.						.	.	.	.	.
Template Conservation																	.	.	.																																				.	.	.						.	.	.	.	.
Template Sequence		L	F	L	K	K	H	F	N	L	T	Y	S	I	Y	C	.	.	.	T	Q	I	Q	D	H	D	Y	I	C	E	L	C	D	G	L	A	R	A	N	G	T	L	I	D	L	C	V	D	I	W	L	Y	I	S	.	.	.	N	N	L	L	K	.	.	.	.	.	L	K	V	G	S	S	T	M	P	H	K	V	N	P
Template Known Secondary structure																	.	.	.	S	S	S																																	.	.	.	T	T	S			.	.	.	.	.						S	S		T	T
Template Predicted Secondary structure																	.	.	.																																				.	.	.						.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.				.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.						.	.	.	.	.	.	290	.	.	.	.	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	C	E	A	L	T	M	L	C	C	Q	V	M	G	N	D	V	A	I	N	M	G	G	A	S	G	N	F	E	L	N	V	F	R	P	M	V	I	H	N	F	L	Q	S	V	R	L	L	A	D	G	M	E	S	F	N	K	H	C	A	V	G	I	E	P	N	R	E	R	I	N	Q	L	L	N	E	S	L	M
Query Conservation
Alig confidence																																																												.
Template Conservation																																																												.
Template Sequence		I	D	F	E	N	A	E	G	N	L	H	I	A	N	A	F	F	K	L	F	S	S	K	L	P	T	S	R	L	Q	R	D	L	S	D	S	T	V	L	R	N	I	G	S	S	L	A	Y	C	L	I	A	Y	K	S	V	L	K	.	G	L	N	K	I	D	I	D	R	R	N	L	E	E	E	L	N	Q	N	W	S
Template Known Secondary structure																									T	T			S	T	T			T							T	T																		.			T	T														T		G	G
Template Predicted Secondary structure																																																												.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		408	.	410	.	.	.	.	.	.									.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.		.	.	.	.	.	.	450	.	.	.			.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.																												.											.	.
Query SS confidence											.	.	.	.	.	.	.	.																												.											.	.
Query Sequence		L	V	T	A	L	N	T	H	I	.	.	.	.	.	.	.	.	G	Y	D	K	A	A	E	I	A	K	K	A	H	K	E	G	L	T	L	K	A	A	A	L	A	L	G	.	Y	L	S	E	A	E	F	D	S	W	.	.	V	R	P	E	Q	M	V	G	S	M
Query Conservation											.	.	.	.	.	.	.	.																												.											.	.
Alig confidence											.	.	.	.	.	.	.	.																												.											.	.
Template Conservation
Template Sequence		T	L	A	E	P	I	Q	I	V	M	K	R	H	N	Y	V	D	A	Y	E	E	L	K	Q	F	T	R	G	K	V	I	D	Q	K	I	M	Q	E	F	I	K	T	K	C	A	F	L	P	Q	D	V	V	D	Q	L	L	E	L	T	P	A	T	Y	T	G	Y	A
Template Known Secondary structure		G	G											T	T		S											T	T	S															S	T	T	S													T	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.