Job Description P05042 Confidence 100.00% Date Thu Jan 5 10:58:37 GMT 2012 Rank 27 Aligned Residues 429 % Identity 15% Template c2ptsA_ PDB info PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: crystal structure of wild type escherichia coli adenylosuccinate lyase Resolution 2.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		S	E	K	D	S	M	G	A	I	D	V	P	A	D	K	L	W	G	A	Q	T	Q	R	S	L	E	H	F	R	I	S	T	E	K	M	P	T	S	L	I	H	A	L	A	L	T	K	R	A	A	A	K	V	N	E	D	L	G	L	L	S	E	.	.	E	K	A	S	A	I	R	Q	A	A	D	E	V	L	A	G
Query Conservation																																																																.	.
Alig confidence												.																		.	.	.	.	.	.																													.	.
Template Conservation												.																		.	.	.	.	.	.
Template Sequence		X	E	L	S	S	L	T	A	V	S	.	P	V	D	G	R	Y	G	D	K	V	S	A	L	R	G	I	F	.	.	.	.	.	.	S	E	Y	G	L	L	K	F	R	V	Q	V	E	V	R	W	L	Q	K	L	A	A	H	A	A	I	K	E	V	P	A	F	A	A	D	A	I	G	Y	L	D	A	I	V	A	S
Template Known Secondary structure						T	T	T		S	S	.	T	T	T	T	T	T	G	G	G	G					T	T	T	.	.	.	.	.	.	S																							T	T		T	T	S																	T
Template Predicted Secondary structure												.																		.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.							.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	D	D	E	F	P	L	A	I	W	Q	T	G	S	G	T	Q	S	N	M	N	M	N	E	V	L	A	N	R	A	S	E	L	L	G	G	V	R	G	M	E	R	K	V	H	P	N	D	D	V	N	K	S	Q	S	S	N	D	V	F	P	T	A	M	H	V	A	A	L	L	A	L	R	K	Q	L	I	P	Q
Query Conservation
Alig confidence		.																																						.	.	.	.	.	.
Template Conservation		.																																						.	.	.	.	.	.
Template Sequence		.	F	S	E	E	D	A	A	R	I	K	T	I	E	R	T	T	N	H	D	V	K	A	V	E	Y	F	L	K	E	K	V	A	E	I	P	E	L	.	.	.	.	.	.	H	A	V	S	E	F	I	H	F	A	C	T	S	E	D	I	N	N	L	S	H	A	L	X	L	K	T	A	R	D	E	V	I	L	P	Y
Template Known Secondary structure		.																	S															T	T					.	.	.	.	.	.		T	T	G	G	G	T	T	T	T																						T
Template Predicted Secondary structure		.																																						.	.	.	.	.	.
Template SS confidence
			74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110							.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	T	L	T	Q	T	L	N	E	K	S	R	A	F	A	D	I	V	K	I	G	R	T	H	L	Q	D	A	T	P	L	T	L	G	Q	E	I	S	G	W	V	A	M	L	E	H	N	L	K	H	I	E	Y	S	L	P	H	V	A	E	L	A	L	G	G	T	A	V	G	T	G	L	N	T	H	P	E	Y	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	R	Q	L	I	D	G	L	K	D	L	A	V	Q	Y	R	D	I	P	L	L	S	R	T	H	G	Q	P	A	T	P	S	T	I	G	K	E	X	A	N	V	A	Y	R	X	E	R	Q	Y	R	Q	L	N	Q	V	E	I	L	G	K	I	N	G	A	V	G	N	Y	N	A	H	I	A	A	Y	P	E	V	D	W
Template Known Secondary structure																T	T	T								T	T																																						T	T	S	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	V	A	D	E	L	A	V	I	T	C	A	P	F	V	T	A	P	N	K	F	E	A	L	A	T	C	D	A	L	V	Q	A	H	G	A	L	K	G	L	A	A	S	L	M	K	I	A	N	D	V	R	W	L	A	S	G	P	R	C	G	I	G	E	I	S	I	P	E	N	E	P	G	S	S	I	M	P	G
Query Conservation
Alig confidence																					.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	Q	F	S	E	E	F	V	T	S	L	G	I	Q	W	N	P	Y	T	.	.	.	T	Q	I	E	P	H	D	Y	I	A	E	L	F	D	C	V	A	R	F	N	T	I	L	I	D	F	D	R	D	V	W	G	Y	I	A	L	N	H	F	K	.	.	.	.	.	.	.	.	.	.	.	Q	K	T	I	X	P	H
Template Known Secondary structure												T	T								.	.	.	S	S	S																																	T	T				.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.												.	.	.	.	290	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	N	P	T	Q	C	E	A	L	T	M	L	C	C	Q	V	M	G	N	D	V	A	I	N	M	G	G	A	S	G	N	F	E	L	N	V	F	R	P	M	V	I	H	N	F	L	Q	S	V	R	L	L	A	D	G	M	E	S	F	N	K	H	C	A	V	G	I	E	P	N	R	E	R	I	N	Q	L	L	N
Query Conservation
Alig confidence																																																																.
Template Conservation																																																																.
Template Sequence		K	V	N	P	I	D	F	E	N	S	E	G	N	L	G	L	S	N	A	V	L	Q	H	L	A	S	K	L	P	V	S	R	W	Q	R	D	L	T	D	S	T	V	L	R	N	L	G	V	G	I	G	Y	A	L	I	A	Y	Q	S	T	L	K	.	G	V	S	K	L	E	V	N	R	D	H	L	L	D	E	L	D
Template Known Secondary structure					T																								T	T			S	T	T			T						G	G	G																		.			T	T													T
Template Predicted Secondary structure																																																																.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		404	.	.	.	.	.	410					.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.			.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure									.	.	.	.																																						.	.
Query SS confidence									.	.	.	.																																						.	.
Query Sequence		E	S	L	M	L	V	T	.	.	.	.	A	L	N	T	H	I	G	Y	D	K	A	A	E	I	A	K	K	A	H	K	E	G	L	T	L	K	A	A	A	L	A	L	G	Y	L	S	E	.	.	A	E	F	D	S	W	V	R	P	E	Q	M	V	G	S	M
Query Conservation									.	.	.	.																																						.	.
Alig confidence									.	.	.	.																																						.	.
Template Conservation
Template Sequence		H	N	W	E	V	L	A	E	P	I	Q	T	V	X	R	R	Y	G	I	E	K	P	Y	E	K	L	K	E	L	T	R	V	D	A	E	G	X	K	Q	F	I	D	G	L	A	L	P	E	E	E	K	A	R	L	K	A	X	T	P	A	N	Y	I	G	R	A
Template Known Secondary structure		T		G	G	G	G											T	T		S	S																						T	S	S											T			T	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.