Job Description P05042 Confidence 100.00% Date Thu Jan 5 10:58:37 GMT 2012 Rank 17 Aligned Residues 392 % Identity 24% Template c2e9fC_ PDB info PDB header:lyase Chain: C: PDB Molecule:argininosuccinate lyase; PDBTitle: crystal structure of t.th.hb8 argininosuccinate lyase complexed with2 l-arginine Resolution 2.80 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	L	I	H	A	L	A	L	T	K	R	A	A	A	K	V	N	E	D	L	G	L	L	S	E	E	K	A	S	A	I	R	Q	A	A	D	E	V	L	A	G	Q	H	D	D	E	F	P	L	A	I	W	Q	T	G	S	G	T	Q	S	N	M	N	M	N	E	V	L	A	N	R	A	S	E	L	L	G	G	V
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.	.																			.	.
Template Conservation																																																						.	.	.	.	.	.	.	.																			.	.
Template Sequence		R	A	L	W	R	E	D	L	W	Q	N	R	V	H	A	R	M	L	H	A	V	G	L	L	S	A	E	E	L	E	A	I	L	K	G	L	D	R	I	E	E	E	I	E	A	G	T	F	P	W	R	E	.	.	.	.	.	.	.	.	E	L	E	D	V	H	M	N	L	E	A	R	L	T	E	L	V	G	.	.
Template Known Secondary structure		G	G	G																			T	S	S																						T		S				G	.	.	.	.	.	.	.	.	G	G		S															.	.
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.																			.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80									.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		R	G	M	E	R	K	V	H	P	N	D	D	V	N	K	S	Q	S	S	N	D	V	F	P	T	A	M	H	V	A	A	L	L	A	L	R	K	Q	L	I	P	Q	L	K	T	L	T	Q	T	L	N	E	K	S	R	A	F	A	D	I	.	.	V	K	I	G	R	T	H	L	Q	D	A	T	P	L	T	L	G	Q
Query Conservation																																																														.	.
Alig confidence		.	.	.	.	.	.	.																															.																							.	.
Template Conservation		.	.	.	.	.	.	.																															.
Template Sequence		.	.	.	.	.	.	.	P	P	G	G	K	L	H	T	A	R	S	R	N	D	Q	V	A	T	D	L	R	L	Y	L	R	G	A	I	D	E	.	L	L	A	L	L	L	A	L	R	R	V	L	V	R	E	A	E	K	H	L	D	P	L	Y	V	L	P	G	Y	T	H	L	Q	R	A	Q	P	V	L	L	A	H
Template Known Secondary structure		.	.	.	.	.	.	.	G	G	G	G	G	T	T	T	T																						.																			T	T	T	T	T								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																															.
Template SS confidence
									99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		E	I	S	G	W	V	A	M	L	E	H	N	L	K	H	I	E	Y	S	L	P	H	V	A	E	L	A	L	G	G	T	A	.	V	G	T	G	L	N	T	H	P	E	Y	A	R	R	V	A	D	E	L	A	V	I	T	C	A	P	F	V	T	A	P	N	K	F	E	A	L	A	T	C	D	A	L	V	Q	A	H
Query Conservation																																		.
Alig confidence																																		.										.	.	.	.	.	.	.											.
Template Conservation																																												.	.	.	.	.	.	.											.
Template Sequence		W	F	L	A	Y	Y	E	M	L	K	R	D	A	G	R	L	E	D	A	K	E	R	L	N	E	S	P	L	G	A	A	A	L	A	G	T	G	F	P	I	D	R	.	.	.	.	.	.	.	H	F	T	A	R	E	L	G	F	K	.	A	P	M	R	N	S	L	D	A	V	A	S	R	D	F	A	L	E	V	L
Template Known Secondary structure																								T		S	B		T	T		T	T	S	S			S	S					.	.	.	.	.	.	.							T	T		S	.	S	B		S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.											.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.								.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		G	A	L	K	G	L	A	A	S	L	M	K	I	A	N	D	V	R	W	L	A	S	G	P	R	C	G	I	G	E	I	S	I	P	.	E	N	E	P	G	S	S	I	M	P	G	K	V	N	P	T	Q	C	E	A	L	T	M	L	C	C	Q	V	M	G	N	D	V	A	I	N	M	G	G	A	S	G	N	F	E
Query Conservation																																				.
Alig confidence																								.	.	.										.
Template Conservation																								.	.	.
Template Sequence		S	A	L	N	I	G	M	L	H	L	S	R	M	A	E	E	L	I	L	Y	S	T	.	.	.	E	E	F	G	F	V	E	V	P	D	A	F	A	T	G	S	S	I	M	P	Q	K	K	N	P	D	I	L	E	L	I	R	A	K	A	G	R	V	L	G	A	F	V	G	L	S	A	V	V	K	G	L	P	L	A
Template Known Secondary structure																						T	S	.	.	.	T	T	T							G	G	G					S	S	S	T	T													T																T	T			S	S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.				.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.										.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.
Query Sequence		L	N	V	F	R	P	M	V	I	H	N	F	L	Q	S	V	R	L	L	A	D	G	M	E	S	F	N	K	H	C	A	V	G	I	E	P	N	R	E	R	I	N	Q	L	L	N	E	S	L	M	L	V	T	A	L	N	T	H	I	.	.	.	.	.	.	.	.	.	G	Y	D	K	A	A	E	I	A	K	K	A
Query Conservation																																																													.	.	.	.	.	.	.	.	.
Alig confidence																														.																															.	.	.	.	.	.	.	.	.
Template Conservation																														.
Template Sequence		Y	N	K	D	L	Q	E	D	K	E	P	L	L	D	A	L	A	T	Y	R	D	S	L	R	L	L	A	A	.	L	L	P	G	L	K	W	R	R	E	R	M	W	R	A	A	E	G	G	Y	T	L	A	T	E	L	A	D	Y	L	A	E	K	G	L	P	F	R	E	A	H	H	V	V	G	R	L	V	R	R	L
Template Known Secondary structure				G	G	G	G	G	G																					.		G	G	G													S		S	S	T	T											T	T
Template Predicted Secondary structure																														.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		429	430	.	.	.	.	.	.	.	.	.	440	.					.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460								.	.	.
Predicted Secondary structure															.	.	.	.																				.	.	.	.	.	.	.
Query SS confidence															.	.	.	.																				.	.	.	.	.	.	.
Query Sequence		H	K	E	G	L	T	L	K	A	A	A	L	A	.	.	.	.	L	G	Y	L	S	E	A	E	F	D	S	W	V	R	P	E	Q	M	V	.	.	.	.	.	.	.	G	S	M
Query Conservation															.	.	.	.																				.	.	.	.	.	.	.
Alig confidence															.	.	.	.																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	E	G	R	A	L	K	D	L	T	L	E	E	L	Q	A	H	H	P	L	F	A	E	D	A	L	P	L	L	R	L	E	T	A	I	H	R	R	R	S	Y	G	G	T	A
Template Known Secondary structure					T			S	S	S											T	T			G	G	G	G	G	G	S	S					T	T	S			S	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.