Job Description P05042 Confidence 100.00% Date Thu Jan 5 10:58:37 GMT 2012 Rank 29 Aligned Residues 401 % Identity 14% Template c1yisA_ PDB info PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: structural genomics of caenorhabditis elegans: adenylosuccinate lyase Resolution 2.40 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		E	K	D	S	M	G	A	I	D	V	P	A	D	K	L	W	.	G	A	Q	T	Q	R	S	L	E	H	F	R	I	S	T	E	K	M	P	T	S	L	I	H	A	L	A	L	T	K	R	A	A	A	K	V	N	E	D	L	G	L	L	S	E	E	K	A	S	A	I	R	Q	A	A	D	E	V	L	A	G	Q	H
Query Conservation																		.
Alig confidence									.	.	.							.									.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.
Template Conservation									.	.	.																.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.
Template Sequence		S	E	D	K	F	E	S	.	.	.	V	L	S	T	R	Y	C	K	N	S	P	L	V	S	I	.	.	.	.	.	.	.	.	L	S	E	T	N	K	A	T	L	W	R	Q	L	W	I	W	L	A	E	A	E	K	E	L	G	L	K	Q	V	T	Q	D	A	I	D	E	X	K	S	N	.	.	.	.	.	.	.
Template Known Secondary structure		G	G	G	S				.	.	.					T	T	T	T	T		T					.	.	.	.	.	.	.	.	T	S																						T	T		T	T	S											T	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.																.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.				10	.	.	.	.	.	.	.	.	.	20	.	.	.	.									.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	E	F	P	L	A	I	W	Q	T	G	S	G	T	Q	S	N	M	N	M	N	E	V	L	A	N	R	A	S	E	L	L	G	G	V	R	G	M	E	R	K	V	H	P	N	D	D	V	N	K	S	Q	S	S	N	D	V	F	P	T	A	M	H	V	A	A	L	L	A	L	R	K	Q	L	I	P	Q	L	K
Query Conservation
Alig confidence		.	.																																	.	.	.	.	.	.	.	.	.																								.
Template Conservation		.	.																																	.	.	.	.	.	.	.	.	.																								.
Template Sequence		.	.	R	D	V	F	D	W	P	F	I	R	S	E	E	R	K	L	K	H	D	V	X	A	H	N	H	A	F	G	K	L	C	P	.	.	.	.	.	.	.	.	.	T	A	A	G	I	I	H	L	G	A	T	S	C	F	V	Q	D	N	A	D	L	I	A	.	Y	R	D	S	I	D	H	I	L	K	R	F	A
Template Known Secondary structure		.	.	T	T														S	S															T	.	.	.	.	.	.	.	.	.	T	T	G	G	G	T	T	T	T															.
Template Predicted Secondary structure		.	.																																	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
				65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.										.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.							.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.
Query Sequence		T	L	T	Q	T	L	N	E	K	S	R	A	F	A	D	I	V	K	I	G	R	T	H	L	Q	D	A	T	P	L	T	L	G	Q	E	I	S	G	W	V	A	M	L	E	H	N	L	K	H	I	E	Y	S	L	P	H	V	A	E	L	A	L	G	G	T	A	V	G	T	G	.	.	.	.	.	.	L	N	T	H
Query Conservation																																																																								.	.	.	.	.	.
Alig confidence																																																																		.						.	.	.	.	.	.
Template Conservation																																																																		.
Template Sequence		T	V	I	D	R	L	A	A	F	S	L	K	N	K	E	V	V	T	V	G	R	T	H	Y	Q	T	A	S	L	V	T	V	G	K	R	G	V	L	W	A	Q	E	L	L	X	A	F	Q	S	L	S	E	F	R	D	K	X	R	F	R	G	I	K	G	.	A	T	G	T	Q	D	S	F	L	T	L	F	A	G	D
Template Known Secondary structure														T	T	T								T	T																																			B			S		T	.	T	T	S	S								T	T	T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	Y	A	R	R	V	A	D	E	L	A	V	I	T	C	A	P	F	V	T	A	P	N	K	F	E	A	L	A	T	C	D	A	L	V	Q	A	H	G	A	L	K	G	L	A	A	S	L	M	K	I	A	N	D	V	R	W	L	A	S	G	P	R	C	G	I	G	E	I	S	I	P	E	N	E	P	G	S	S
Query Conservation
Alig confidence																			.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	S	K	V	E	A	L	D	E	L	V	T	K	K	A	N	F	.	.	S	N	R	F	L	I	T	G	Q	T	Y	S	R	Q	Q	D	S	Q	L	V	F	S	L	S	L	L	G	A	A	A	K	K	V	C	T	D	I	R	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	F	G	E
Template Known Secondary structure																T	T		.	.	S		B		S	S		S	S	S			T																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S
Template Predicted Secondary structure																			.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.																	.	270	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	P	G	K	V	N	P	T	Q	C	E	A	L	T	M	L	C	C	Q	V	M	G	N	D	V	A	I	N	M	G	G	A	S	G	N	F	E	L	N	V	F	R	P	M	V	I	H	N	F	L	Q	S	V	R	L	L	A	D	G	M	E	S	F	N	K	H	C	A	V	G	I	E	P	N	R	E	R	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	E	P	K	K	N	P	X	K	S	E	R	C	C	A	L	S	R	K	L	I	N	A	P	Q	E	A	L	T	I	L	A	D	Q	G	L	E	R	T	L	D	D	S	A	G	R	R	X	L	I	P	D	V	L	L	T	A	E	A	L	L	T	T	L	Q	N	I	F	E	G	L	S	V	Q	T	D	N	V	K
Template Known Secondary structure																								T	S										T			T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.									.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.		.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.																															.
Query SS confidence														.	.	.	.	.	.	.	.																															.
Query Sequence		Q	L	L	N	E	S	L	M	L	V	T	A	.	.	.	.	.	.	.	.	L	N	T	H	I	G	Y	D	K	A	A	E	I	A	K	K	A	H	K	E	G	L	T	L	K	A	A	A	L	A	.	L	G	Y	L	S	E	A	E	F	D	S	W	V	R	P
Query Conservation														.	.	.	.	.	.	.	.																															.
Alig confidence														.	.	.	.	.	.	.	.																															.
Template Conservation
Template Sequence		K	I	V	E	D	E	I	A	F	L	G	L	E	K	A	X	X	X	L	Q	T	X	A	D	P	F	F	D	S	V	R	D	R	V	V	G	L	V	N	N	P	I	N	F	T	G	R	C	V	S	Q	T	E	S	F	I	A	K	E	L	K	P	T	I	D	K
Template Known Secondary structure																								T	T	T	T	S	T	T	T											G	G	G	G	S	T	T												T						G	G
Template Predicted Secondary structure
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.