Job Description P45753 Confidence 91.08% Date Thu Jan 5 12:03:31 GMT 2012 Rank 36 Aligned Residues 186 % Identity 8% Template c3iucC_ PDB info PDB header:chaperone Chain: C: PDB Molecule:heat shock 70kda protein 5 (glucose-regulated PDBTitle: crystal structure of the human 70kda heat shock protein 52 (bip/grp78) atpase domain in complex with adp Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	F	K	I	W	Q	I	G	L	H	L	Q	Q	Q	E	A	V	A	V	A	I	V	R	G	A	K	E	C	F	L	Q	R	W	W	R	L	P	L	E	N	D	I	I	K	D	G	R	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.
Template Sequence		M	D	.	V	G	T	V	V	G	I	D	L	G	T	T	Y	S	C	V	G	V	F	K	N	G	R	V	E	I	I	A	N	D	Q	G	N	R	I	T	P	S	Y	V	A	F	T	P	E	G	E	R	L	I	G	D	A	A	K	N	Q	L	T	S	N	P	E	N	T	V	F	D	A	K	R	L	I	G	R	T	W
Template Known Secondary structure		S	S	.	B										S	S									T	T								T	T	S		S	S									T	T	S					T					T	T	T	T	T		S	T	T					G	G	G	T	T	T			T
Template Predicted Secondary structure				.
Template SS confidence
		25	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	Q	Q	L	A	K	T	L	L	P	W	S	R	E	L	P	Q	R	H	H	I	M	L	A	F	P	A	S	R	T	L	Q	R	S	F	P	R	P	S	M	S	L	G	E	R	E	Q	T	A	W	L	S	G	T	M	A	R	E	L	D	M	D	P	D	S	L	R	F	D	Y	S	E	D	S	L	S	P	A	Y
Query Conservation
Alig confidence																																															.	.																									.					.	.	.	.
Template Conservation																																															.	.																									.					.	.	.	.
Template Sequence		N	D	P	S	V	Q	Q	D	I	K	F	L	P	F	K	V	V	E	K	K	T	K	P	Y	I	Q	V	D	I	G	G	G	Q	T	K	T	F	A	P	E	E	I	S	A	M	.	.	V	L	T	K	M	K	E	T	A	E	A	Y	L	G	K	K	V	T	H	A	V	V	T	V	.	P	A	Y	F	.	.	.	.
Template Known Secondary structure		T									T	T		S	S						T	T									S	T	T														.	.														T	S	B									.		T	T		.	.	.	.
Template Predicted Secondary structure																																															.	.																									.					.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	T	A	A	Q	S	K	E	L	A	T	L	L	T	L	A	E	R	L	R	V	H	V	S	A	I	T	P	D	A	S	A	L	Q	R	F	L	P	F	L	P	S	H	Q	Q	C	L	A	W	R	D	N	E	Q	W	L	W	A	T	R	Y	S	W	G	R	K	L	A
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	N	D	A	Q	R	Q	A	T	K	D	A	G	T	I	A	G	L	N	V	M	R	I	I	N	E	P	T	A	A	A	I	A	Y	G	L	D	K	G	E	K	N	I	L	V	F	D	L	G	G	G	T	F	D	V	S	L	L	T	I	D	N	G	V	F
Template Known Secondary structure		.	.	.	.	.																T																	T	T	T	T													S	S											T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions