|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
50 | . | . | |
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. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
|
. | 70 | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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| . |
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|  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
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| . | . |
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|  |  |  |  |
Query SS confidence |   |
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| . |
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| . |
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. |
. |
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| . |
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Query Sequence |   |
A | F | K | I | W | Q | I | G | L | H | L | Q | Q | Q | E | A | V | A | V | A | I | V | R | G | A | K | E | C | F | L | Q | R | W | W | R | L | P | L | E | N | D | I | I | K | D | G | R | I | . |
V | D | A | . |
. |
. |
. |
Q | Q | L | A | K | T | L | L | P | W | S | R | E | L | P | Q | . |
. |
R | H | H | I | M | L |
Query Conservation |   |
  |   |   |   |
|   |
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|   |   |   |   |
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|   |
|   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
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|   |   |   |   |   |   |
|   |   | . |   |   |   | . | . | . | . |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   | . | . |   |   |   |
|   |
|
Alig confidence |   |
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| . | . | . |
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| . |
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| . | . | . | . |
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| . | . |
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Template Conservation |   |
  |   |   |   |
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|   |
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|   |
|   |
|   |   |
|   | . | . | . |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
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|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
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|
Template Sequence |   |
A | X | E | K | Y | I | L | S | I | D | Q | G | T | T | S | S | R | A | I | L | F | N | Q | K | G | E | . |
. |
. |
I | A | G | V | A | Q | R | E | F | K | Q | Y | F | P | Q | S | G | W | V | E | H | D | A | N | E | I | W | T | S | V | L | A | V | X | T | E | V | I | N | E | N | D | V | R | A | D | Q | I | A | G | I |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |
| T | T | S |
| . | . | . |  |  |  |  |  |  |  |  |
|
|
| B |
|
| S | T | T |
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|
| G | G | G |  |  |  |  |
Template Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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| . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
0 | . | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
  |
  |   |
75 | . | . | . | . | 80 |
Predicted Secondary structure |   |
 |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
A | F | P | A | S | R |
Query Conservation |   |
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |
Template Sequence |   |
G | I | T | N | Q | R |
Template Known Secondary structure |   |
 |  |  |  |
| S |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
  |   |
77 | . | . | 80 | . | . |
  |