|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
50 | . | . | . | . | . | |
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. | . | . | . | 60 | . | . | . | . | . | . | |
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. | . | . | 70 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |
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| . |
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|  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |
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| . | . |
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|  |  |  |  |  |  |
Query SS confidence |   |
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| . |
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| . |
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. |
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| . |
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Query Sequence |   |
K | I | W | Q | I | G | L | H | L | Q | Q | Q | E | A | V | A | V | A | I | V | R | G | A | K | E | C | F | L | Q | R | W | W | R | L | P | L | E | N | D | I | I | K | D | G | R | I | . |
V | D | A | Q | Q | L | . |
. |
. |
. |
A | K | T | L | L | P | W | S | R | E | L | . |
. |
P | Q | R | H | H | I | M | L | A | F |
Query Conservation |   |
  |   |
|   |
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|   |
|   |
|   |   |   |   |   |
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|   |   |   |   |   |   |
|   |   | . |   |   |   |   |   |
| . | . | . | . |   |   |   |
|   |   |
|   |   |   |   | . | . |   |   |   |   |   |
|   |
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Alig confidence |   |
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| . | . | . |
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| . | . |
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Template Conservation |   |
  |   |
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|   |
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|   |
|   |   |
|   |
|   |   |
|   | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
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|   |
|
Template Sequence |   |
K | K | Y | I | V | A | L | D | Q | G | T | T | S | S | R | A | V | V | M | D | H | D | A | N | . |
. |
. |
I | I | S | V | S | Q | R | E | F | E | Q | I | Y | P | K | P | G | W | V | E | H | D | P | M | E | I | W | A | T | Q | S | S | T | L | V | E | V | L | A | K | A | D | I | S | S | D | Q | I | A | A | I | G | I |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  | T | T |
|
| . | . | . |  |  |  |  |  |  |  |  |
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| B |
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| S | T | T |
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|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| G | G | G |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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| . | . | . |  |  |  |  |  |  |  |  |
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|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
|
|
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
77 | . | . | 80 |
Predicted Secondary structure |   |
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Query SS confidence |   |
|
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|
Query Sequence |   |
P | A | S | R |
Query Conservation |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|   |   |   |
Template Sequence |   |
T | N | Q | R |
Template Known Secondary structure |   |
 |  |
| S |
Template Predicted Secondary structure |   |
|
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|
Template SS confidence |   |
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|
  |   |
80 | . | . | . |
  |