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5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
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. | 70 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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| . | . | . | . | . | . |
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Query SS confidence |   |
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| . |
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Query Sequence |   |
I | W | Q | I | G | L | H | L | Q | Q | Q | E | A | V | A | V | A | I | V | R | G | A | K | E | C | F | L | Q | R | W | W | R | L | P | L | E | N | D | I | I | K | D | G | R | I | . |
V | D | A | Q | Q | L | A | K | T | L | L | P | W | S | R | E | L | P | Q | . |
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R | H | H | I | M | L | A | F | P |
Query Conservation |   |
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|   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |
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Alig confidence |   |
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| . | . | . |
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Template Conservation |   |
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|   | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
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Template Sequence |   |
D | Y | V | L | A | I | D | Q | G | T | T | S | S | R | A | I | V | F | D | H | S | G | E | . |
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. |
I | Y | S | T | G | Q | L | E | H | D | Q | I | F | P | R | A | G | W | V | E | H | N | P | E | Q | I | W | N | N | V | R | E | V | V | G | L | A | L | T | R | G | N | L | T | H | E | D | I | A | A | V | G | I | T |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |
| T | T | S |
| . | . | . |  |  |  |  |  |  |  |  |
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| B |
| S | S | T | T |
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|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
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| G | G | G |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
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| . | . | . |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
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. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
78 | . | 80 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | S | R |
Query Conservation |   |
  |   |   |
Alig confidence |   |
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Template Conservation |   |
  |   |   |
Template Sequence |   |
N | Q | R |
Template Known Secondary structure |   |
 |
| S |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
80 | . | . |
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