Job Description P45753 Confidence 67.70% Date Thu Jan 5 12:03:31 GMT 2012 Rank 61 Aligned Residues 141 % Identity 18% Template c1jcgA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:rod shape-determining protein mreb; PDBTitle: mreb from thermotoga maritima, amppnp Resolution 3.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																											.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	F	K	I	W	Q	I	G	L	H	L	Q	Q	Q	E	A	V	A	V	A	I	V	R	G	A	K	E	C	F	L	Q	R	W	W	R	L	P	L	E	N	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	D	G	R	I	V	D	A	Q	Q
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.																.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.																.	.	.
Template Sequence		M	L	R	K	.	.	D	I	G	I	D	L	G	T	A	N	T	L	V	F	L	.	.	.	R	G	K	G	I	V	V	N	E	P	S	V	I	A	I	D	S	T	T	G	E	I	L	K	V	G	L	E	A	K	N	M	I	G	K	T	P	A	T	I	K	A	I	R	P	M	R	D	G	V	I	A	D	Y	T	V
Template Known Secondary structure				S		.	.								S	S							.	.	.	T	T	T								S						T	T	T							S					T	T	T	T	S			T	T									T	T			S	S
Template Predicted Secondary structure						.	.																.	.	.
Template SS confidence
		1	.	.	.			.	.	.	.	.	10	.	.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		55	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		L	A	K	T	L	L	P	W	S	R	E	.	.	.	.	.	L	P	Q	R	H	H	I	M	L	A	F	P	A	S	R	T	L	Q	R	S	F	P	R	P	S	M	S	L	G	E	R	E	Q	T	A	W	L	S	G	T	M	A	R	E	L	D	M	D	P	D	S	L	R	F	D	Y	S	E	D	S	L	S	P	A
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	V	M	L	R	Y	F	I	N	K	A	K	G	G	M	N	L	F	K	P	R	V	V	I	G	V	P	I	G	I	T	D	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															T	S			S	S										S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		Y	N	V	T	A	A	Q	S	K	E	L	A	T	L	L	T	L	A	E	R	L	R	V	H	V	S	A	I	T	P	D	A	S	A	L	Q	R	F	L	P	F	L	P	.	S	H	Q	Q	C	L	A	W	R	D	N	E	Q	W	L	W	A	T	R	Y	S	W	G	R	K	L	A	V	G
Query Conservation																																													.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	R	R	A	I	L	D	A	G	L	E	A	G	A	S	K	V	F	L	I	E	E	P	M	A	A	A	I	G	S	N	L	N	V	E	E	P	S	G	N	M	V	V	D	I	G	G	G	T	T	E	V	A	V	I	S	L	G	S	I	V	T	W	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.										T	T	T		S														T	T	T			S	S	S	S	S									S	S									T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions