Job Description P34209 Confidence 9.32% Date Thu Jan 5 11:53:02 GMT 2012 Rank 86 Aligned Residues 100 % Identity 24% Template d2vapa1 SCOP info Tubulin nucleotide-binding domain-like Tubulin nucleotide-binding domain-like Tubulin, GTPase domain Resolution 1.70

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.										.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Query Sequence		D	F	S	G	E	V	P	Y	Q	A	D	C	V	I	L	A	G	.	.	.	.	.	.	.	.	.	N	A	V	M	P	T	I	D	A	A	C	K	I	A	R	D	.	.	.	.	.	.	.	Q	Q	I	P	L	L	I	S	G	G	I	G	H	S	T	T	F	L	Y	S	A	I	A	Q	H	P	H	Y	N	T	I
Query Conservation																			.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	Q	Q	L	I	R	T	K	A	D	K	K	I	L	I	G	K	K	L	T	R	G	L	G	A	G	G	N	P	K	I	G	E	E	A	A	K	E	S	A	E	E	I	K	A	A	I	Q	D	S	D	M	V	F	I	T	C	G	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		B						T	S			S							T	T	T	T	T	T	B			T	T												T									T	T		S								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		R	T	T	G	R	A	E	A	T	I	L	A	D	I	A	H	Q	F	W	H	I	P	H	E	K	I	W	I	E	D	Q	.	.	.	S	T	N	C	G	E	N	A	R	F	S	I	A	L	L	N	Q	A	V	E	R	V	H	T	A	I	V	V
Query Conservation																																	.	.	.
Alig confidence																				.													.	.	.																			.	.	.
Template Conservation																				.																																		.	.	.
Template Sequence		G	G	T	G	T	G	S	A	P	V	V	A	E	I	S	K	K	I	.	G	A	L	T	V	A	V	V	T	L	P	F	V	M	E	G	K	V	R	M	K	N	A	M	E	G	L	E	R	L	K	Q	H	.	.	.	T	D	T	L	V	V	I
Template Known Secondary structure		S	S																T	.	T												G	G	G																	T	T	.	.	.		S
Template Predicted Secondary structure																				.																																		.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions