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Job DescriptionP34209
Confidence38.09%DateThu Jan 5 11:53:02 GMT 2012
Rank15Aligned Residues81
% Identity12%Templatec3fi9B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of malate dehydrogenase from porphyromonas2 gingivalis
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   37..40.........50......... 60.........70.........80.........90.........100.......
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Query Sequence  ADCVILAGNAVMPTIDAACKIAR. . . . . . . . . DQQIPLLISGGIGHSTTFLYSAIAQHPHYNTIRTTGRAEATILADIAH
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Template Sequence  AKYIVSSGGTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF. . . . . . . . . . . . . . . . . . . . . . . . . . NPADITGLVTL
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   75....80.........90.........100.........110....... ..120........
 
   108.110.........120.........130.........140.......
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Query Sequence  QFWHIPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTA
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Template Sequence  IYSGLKPSQVT. . . . TLAGLDSTRLQSELAKHFGIKQSLV
Template Known Secondary structure  T

GGG....

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GGG
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   136...140...... ...150.........160.........170.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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