Job Description P34209 Confidence 9.29% Date Thu Jan 5 11:53:02 GMT 2012 Rank 88 Aligned Residues 29 % Identity 21% Template c3c01H_ PDB info PDB header:membrane protein, protein transport Chain: H: PDB Molecule:surface presentation of antigens protein spas; PDBTitle: crystal structural of native spas c-terminal domain Resolution 2.60 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	Q	I	P	L	L	I	S	G	G	I	G	H	S	T	T	F	L	Y	S	A	I	A	Q	H	P	H	Y	N	T	I	R	T	T	G	R	A	E	A	T	I	L	A	D	I	A	H	Q	F	W	H	I	P
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		L	M	P	I	P	M	I	S	V	Y	E	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	A	L	A	V	R	A	Y	A	E	K	V	.	G	V	P
Template Known Secondary structure		T		S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.																									.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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