 |
Job Description | P34209 | Confidence | 19.25% | Date | Thu Jan 5 11:53:02 GMT 2012 |
Rank | 38 | Aligned Residues | 29 |
% Identity | 14% | Template | c2k23A_ |
PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:lipocalin 2; |
PDBTitle: solution structure analysis of the rlcn2
|
Resolution | UNK |
|
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | I | L | A | D | I | A | H | Q | F | W | H | I | P | H | E | K | I | W | I | E | D | Q | S | T | N | C | G | E | N |
Query Conservation |   |
|
|
|
|   |   |
|
|   |   |   |
|
|
|   |   |   |
|
|
|
|   |   |
|   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   | . |
|
|   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
E | R | F | V | S | F | A | K | S | L | . |
G | L | K | D | N | N | I | V | F | S | V | P | T | D | Q | C | I | D | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | . | T |
|
| G | G | G |  |  |
|
|
|
|
| S | S | S |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
150 | . | . | . | . | . | . | . | . | . | |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|