Job Description P34209 Confidence 8.66% Date Thu Jan 5 11:53:02 GMT 2012 Rank 96 Aligned Residues 56 % Identity 16% Template c2dhgA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:trna selenocysteine associated protein (secp43); PDBTitle: solution structure of the c-terminal rna recognition motif2 in trna selenocysteine associated protein Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.				.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																					.	.	.			.	.
Query SS confidence																					.	.	.			.	.
Query Sequence		I	F	I	N	Q	L	Q	G	L	W	P	V	E	R	Y	L	S	L	L	.	.	.	T	G	.	.	E	L	P	R	L	R	D	D	S	D	G	Y	G	P	R	G	R	D	F	I	V	H	V	D	F	P	A	E	V	I	H	A	W	Q	T	L	K
Query Conservation																					.	.	.			.	.
Alig confidence																					.	.	.			.	.												.								.
Template Conservation																																							.								.
Template Sequence		L	F	V	G	D	L	T	P	D	V	D	D	G	M	L	Y	E	F	F	V	K	V	Y	P	S	C	R	G	G	K	V	V	L	D	Q	T	G	.	V	S	K	G	Y	G	F	.	V	K	F	T	D	E	L	E	Q	K	R	A	L	T	E	C	Q
Template Known Secondary structure									T	T															T	T										T	T		.								.				S												T	T
Template Predicted Secondary structure																																							.								.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions