Job Description P34209 Confidence 16.57% Date Thu Jan 5 11:53:02 GMT 2012 Rank 48 Aligned Residues 88 % Identity 8% Template c1zuoA_ PDB info PDB header:ligase Chain: A: PDB Molecule:hypothetical protein loc92912; PDBTitle: structure of human ubiquitin-conjugating enzyme (ubci)2 involved in embryo attachment and implantation Resolution 1.80 Å

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		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	R	M	T	G	D	N	P	D	A	P	R	W	L	S	Y	P	G	F	V	P	Q	L	G	N	N	A	D	S	V	I	F	I	N	Q	L	Q	G	L	W	P	V	E	R	Y	L	S	L	L	T	G	E	L	P	R	L	R	D	D	S	D	G	Y	G	P	R	G	R	D	F	I	V	H	V	D	F	P	A	E
Query Conservation
Alig confidence																		.																																																						.	.
Template Conservation																		.																																																						.	.
Template Sequence		F	K	D	N	F	P	F	D	P	P	F	V	R	V	V	L	.	P	V	L	S	G	G	Y	V	L	G	G	G	A	L	C	M	E	L	L	T	K	Q	G	W	S	S	A	Y	S	I	E	S	V	I	M	Q	I	N	A	T	L	V	K	G	K	A	R	V	Q	F	G	A	N	.	.	K	N	Q	Y	N	L	A	R
Template Known Secondary structure				T	T	T	T	S	S									.	S				S	T	T	B		G	G	G	B	B			G	G	G	S	T	T	T			T	T	S																T	T					T	T			.	.	T	T
Template Predicted Secondary structure																		.																																																						.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.			.	.	.	.	.	.	.	350
		243	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	H	A	W	Q	T	L	K	H	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	Q	S	Y	N	S	I	V	Q	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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