Job Description P25737 Confidence 2.57% Date Wed Jan 25 15:20:45 GMT 2012 Rank 28 Aligned Residues 130 % Identity 11% Template d1iwga8 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	A	L	Y	A	T	T	V	I	A	G	L	C	F	L	T	S	M	F	G	N	Q	T	V	Y	L	W	L	L	N	T	S	G	M	T	G	F	I	A	W	L	G	I	A	I	S	H	Y	R	F	R	R	G	Y	V	L	Q	G	H	D	I	N	D	L	P	Y	R	S	G	F	F	P	L	G	P	I	F	A	F
Query Conservation
Alig confidence																																																	.	.
Template Conservation																																																	.	.
Template Sequence		V	M	L	V	V	P	L	G	V	I	G	A	L	L	A	A	T	F	R	G	L	T	N	D	V	Y	F	Q	V	G	L	L	T	T	I	G	L	S	A	K	N	A	I	L	I	V	E	.	.	F	A	K	D	L	M	D	K	E	G	K	G	L	I	E	A	T	L	D	A	V	R	M	R	L	R	P	I	L	M	T
Template Known Secondary structure		G	G	G																T	T			B																									.	.						T	T	S	S				T	T									T	T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		901	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.			.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.							.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.
Query Sequence		I	L	C	L	I	I	T	L	G	Q	N	Y	E	A	F	L	K	D	T	I	D	W	G	G	V	A	A	T	Y	I	G	I	P	L	F	L	I	I	W	F	G	.	.	.	.	.	.	Y	K	L	I	K	G	T	H	F	V	R
Query Conservation																																											.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	A	F	I	L	G	V	M	P	L	V	I	S	T	G	A	G	S	G	A	Q	N	A	V	G	T	G	V	M	G	G	M	V	T	A	T	V	L	A	I	F	F	V	P	V	F	F	V	V	V	R	R	R	F	S	R	K
Template Known Secondary structure														T	T		S	S	S																				T	T	T	T	S	S	S	S	S	S								T	S
Template Predicted Secondary structure
Template SS confidence
		979	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions