Job Description P25737 Confidence 99.53% Date Wed Jan 25 15:20:45 GMT 2012 Rank 4 Aligned Residues 449 % Identity 10% Template c2xq2A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sodium/glucose cotransporter; PDBTitle: structure of the k294a mutant of vsglt Resolution 2.73 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	L	K	A	R	H	L	T	M	I	A	I	G	G	S	I	G	T	G	L	F	V	A	S	G	A	T	I	S	Q	A	G	P	G	G	A	L	L	S	Y	M	L	I	G	L	M	V	Y	F	L	M	T	S	L	G	E	L	A	A	Y	M	P	V	S	G	S	F	A	T	Y	G	Q	N	Y	V	E	E	G	F
Query Conservation
Alig confidence																																			.																																.
Template Conservation																																			.																																.
Template Sequence		V	S	L	P	W	W	A	V	G	A	S	L	I	A	A	N	I	S	A	E	Q	F	I	G	M	S	G	S	G	Y	S	I	G	.	L	A	I	A	S	Y	E	W	M	S	A	I	T	L	I	I	V	G	K	Y	F	L	P	I	F	I	E	K	G	I	Y	.	T	I	P	E	F	V	E	K	R	F	N	K	K	L
Template Known Secondary structure															G	G	G	S	S														T		.	G	G	G	G																T								T	T			.	S									T
Template Predicted Secondary structure																																			.																																.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		G	F	A	L	G	W	N	Y	W	Y	N	W	.	A	V	T	I	A	V	D	L	V	A	A	Q	L	V	M	S	W	W	F	P	D	T	P	G	W	I	W	S	A	L	F	L	G	V	I	F	L	L	N	Y	I	S	V	R	G	F	G	E	A	E	Y	W	F	S	L	I	K	V	T	T	V	I	V	F	I	I	V
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		K	T	I	L	A	V	F	W	I	S	L	Y	I	F	V	N	L	T	S	V	L	Y	L	G	G	L	A	L	E	T	I	L	G	I	P	L	M	Y	S	I	L	G	L	A	L	F	A	L	V	Y	S	I	Y	G	G	V	V	W	T	D	V	I	Q	V	F	F	L	V	L	G	G	F	M	T	T	Y	M	A	V	S
Template Known Secondary structure																T																																						T	T
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.											.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																																												.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.																																												.	.	.
Query Sequence		G	V	L	M	I	I	G	I	F	K	.	.	.	.	.	.	.	.	.	.	G	A	Q	P	A	G	W	S	N	W	T	I	G	E	A	P	F	A	G	G	F	A	A	M	I	G	V	A	M	I	V	G	F	S	F	Q	G	T	E	L	I	G	I	.	.	.	A	A	G	E	S	E	D	P	A	K	N	I	P	R
Query Conservation												.	.	.	.	.	.	.	.	.	.																																												.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.																																												.	.	.
Template Conservation
Template Sequence		F	I	G	G	T	D	G	W	F	A	G	V	S	K	M	V	D	A	A	P	G	H	F	E	M	I	L	D	Q	S	N	P	Q	Y	M	N	L	P	G	I	A	V	L	I	G	G	L	W	V	A	N	L	Y	Y	W	G	F	N	Q	Y	I	I	Q	R	T	L	A	A	K	S	V	S	E	A	Q	K	G	I	V	F
Template Known Secondary structure					G	G	G														G	G	G	S		S	S			S	S	S	G	G	G	G	T	S		T	T					S	T										T	T	T		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	R	Q	V	F	W	R	I	L	L	F	Y	V	F	A	I	L	I	I	S	L	I	I	P	Y	T	D	P	S	L	L	R	N	D	V	K	D	I	S	V	S	P	F	T	L	V	F	Q	H	A	G	L	L	S	A	A	A	V	M	N	A	V	I	L	T	A	V	L	S	A	G	N	S	G	M	Y	A	S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	F	L	A	L	I	V	P	F	L	V	V	L	P	G	I	A	A	Y	V	I	T	S	D	P	Q	L	M	A	S	L	G	N	L	P	S	A	A	N	A	D	K	A	Y	P	W	L	T	Q	F	L	P	V	G	V	K	G	V	V	F	A	A	L	A	A	A	I	V	S	S	L	A	S	M	L	N	S	T	A
Template Known Secondary structure						T	T	T						T											T														S	T	B	G	G	G								T	S
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	L	Y	T	L	A	C	D	G	K	A	P	R	I	F	A	K	L	S	R	G	G	V	P	R	N	A	L	Y	A	T	T	V	I	A	G	L	C	F	L	T	S	M	F	G	N	Q	T	V	Y	L	W	L	L	N	T	S	G	M	T	G	F	I	A	W	L	G	I	A	I	S	H	Y	R	F	R	R	G	Y
Query Conservation
Alig confidence																																										.																																					.	.	.
Template Conservation																																										.																																					.	.	.
Template Sequence		T	I	F	T	M	D	I	Y	K	E	Y	I	S	P	D	S	G	D	H	K	L	V	N	V	G	R	T	A	A	V	V	A	L	I	I	A	A	L	I	A	.	P	M	L	G	G	I	G	Q	C	F	Q	Y	I	Q	E	Y	T	G	L	V	S	P	G	I	L	A	V	F	L	L	G	L	F	W	K	K	.	.	.
Template Known Secondary structure								T					T		S																										G	.	G	G	G	G	G		B											T	T	T															T	T	.	.	.
Template Predicted Secondary structure																																										.																																					.	.	.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.		.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	Q	G	H	D	I	N	D	L	P	Y	R	S	G	F	F	P	L	G	P	I	F	A	F	I	L	C	L	I	I	T	L	G	Q	N	Y	E	A	F	L	K	D	T	I	D	W	G	G	V	A	A	T	Y	I	G	I	P	L	F	L	I	I	W	F	G	Y	K	L	I	K	G	T	H	F	V	R	Y	S	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	K	G	A	I	I	G	V	V	A	S	I	P	F	A	L	F	L	K	F	M	P	L	S	M	P	F	.	.	M	D	Q	M	L	Y	T	L	L	F	T	M	V	V	I	A	F	T	S	L	S	T	S	I	N	D	D	D	P	K	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							S	S						.	.																								S	S	S	S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template SS confidence
																				451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.			480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
		481	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	F	P	Q	N	D	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	V	T	S	S	M	F	V
Template Known Secondary structure						S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		511	.	.	.	.	.	.	.	.