Job Description P25737 Confidence 1.48% Date Wed Jan 25 15:20:45 GMT 2012 Rank 82 Aligned Residues 164 % Identity 12% Template c1mhsA_ PDB info PDB header:membrane protein, proton transport Chain: A: PDB Molecule:plasma membrane atpase; PDBTitle: model of neurospora crassa proton atpase Resolution 8.00 Å

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		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.			.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		L	Y	T	L	A	C	D	G	K	A	P	R	I	F	A	K	L	S	R	G	G	V	P	R	N	A	L	Y	A	T	T	V	I	.	.	A	G	L	C	F	L	T	S	M	F	G	N	Q	T	V	Y	L	W	L	L	N	T	S	G	M	T	G	F	I	A	W	L	G	I	A	I	S	H	Y	R	F	R	R	G	Y
Query Conservation																																			.	.
Alig confidence																																			.	.
Template Conservation
Template Sequence		T	L	A	I	A	Y	D	N	A	P	Y	S	Q	T	P	V	K	W	N	L	P	K	L	W	G	M	S	V	L	L	G	V	V	L	A	V	G	T	W	I	T	V	T	T	M	Y	A	Q	G	E	N	G	G	I	V	Q	N	F	G	N	M	D	E	V	L	F	L	Q	I	S	L	T	E	N	W	L	I	F	I	T
Template Known Secondary structure										S	G	G	G	G	S						S	S	S		S	S																					T	T	T	T	T	T			S	S	S	S	S	S	S																	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		733	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	Q	G	H	D	I	N	D	L	P	Y	R	S	G	F	F	P	L	G	P	I	F	A	F	I	L	C	L	I	I	T	L	G	Q	N	Y	E	A	F	L	K	D	T	I	D	W	G	G	V	A	A	T	Y	I	G	I	P	L	F	L	I	I	W	F	G	Y	K	L	I	K	G	T	H	F	V	R	Y	S	E
Query Conservation
Alig confidence																	.	.	.
Template Conservation																	.	.	.
Template Sequence		R	A	N	G	P	F	W	S	S	I	P	S	W	Q	L	.	.	.	S	G	A	I	F	L	V	D	I	L	A	T	C	F	T	I	W	G	W	F	E	H	S	D	T	S	I	V	A	V	V	R	I	W	I	F	S	F	G	I	F	C	I	M	G	G	V	Y	Y	I	L	Q	D	S	V	G	F	D	N	L	M	H
Template Known Secondary structure		S		S	S	S		S			S		T				.	.	.																S	S	S	S	T	T	S		S					T								T	T																		T	T
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		813	.	.	.	.	.	.	820	.	.	.	.	.	.	.				.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.
		481	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	F	P	Q	N	D	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	S	P	K	G	N	Q	K
Template Known Secondary structure				S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		890	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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