 |
Job Description | P0A6H8 | Confidence | 9.85% | Date | Thu Jan 5 11:03:10 GMT 2012 |
Rank | 100 | Aligned Residues | 116 |
% Identity | 11% | Template | d1xeaa1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
|
Resolution | 2.65 |
|
 |
  |   |
233 | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | I | A | Y | T | G | S | M | N | M | V | D | P | R | Y | F | K | Q | D | A | G | V | G | Q | W | I | D | L | M | A | R | M | E | G | P | I | A | T | A | M | G | I | I | Y | S | C | D | W | E | I | E | T | G | K | R | I | L | P | P | P | P | D | V | N | I | M | P | F | E | Q | A | S | G | H | T | I | H | T | I | A |
Query Conservation |   |
  |   |   |   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|
Template Sequence |   |
K | I | A | X | I | G | L | G | D | I | A | Q | K | A | Y | L | P | V | L | A | Q | W | P | D | I | E | L | V | L | C | T | R | N | P | K | V | L | G | T | L | A | T | R | Y | R | V | S | A | T | C | T | D | Y | R | D | V | L | Q | Y | G | V | D | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | X | I |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  | T |  |  |  |  |  | T | T | S | T | T |  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
| S | S | T | T | G | G | G | G | G |
|
| S |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . |
  |
  |   |
313 | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | G | P | G | F | P | E | D | L | I | H | Q | A | L | L | T | A | A | Y | S | A | R | E | Y | L | I | M | T | T | P | Y | F | V | P | S | D | D | L | L | H | A | I | C | T | A | A | Q | R | G | V | D | V | S | I |
Query Conservation |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |
|
|
|
|   |
|
|   |   |
|   |   |
|
|   |   |
|
|   |
|
|
|   |
|   |
|
Alig confidence |   |
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
| . | . | . | . |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|   |
|   |   |
|
|
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
Template Sequence |   |
H | A | A | . |
. |
. |
. |
T | D | V | H | S | T | L | A | A | F | F | L | H | L | G | I | P | T | F | V | D | K | P | L | A | A | S | A | Q | E | C | E | N | L | Y | E | L | A | E | K | H | H | Q | P | L | Y | V |
Template Known Secondary structure |   |
| S |
| . | . | . | . | G | G | G |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | S |
| S |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
70 | . | . | |
|
|
|
. | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|