Job Description P0A6H8 Confidence 61.17% Date Thu Jan 5 11:03:10 GMT 2012 Rank 24 Aligned Residues 72 % Identity 8% Template d1jy1a1 SCOP info Phospholipase D/nuclease Phospholipase D/nuclease Tyrosyl-DNA phosphodiesterase TDP1 Resolution 1.69

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		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		R	G	I	H	C	R	L	M	L	D	S	A	G	S	V	A	F	F	R	S	P	W	P	E	L	M	R	N	A	G	I	E	V	V	E	A	L	K	V	N	L	M	R	V	F	L	R	R	M	D	L	R	Q	H	R	K	M	I	M	I	.	.	.	D	N	Y	I	A	Y	T	G	S	M	N	M	V	D	P	R	Y
Query Conservation																																																														.	.	.
Alig confidence										.	.	.																				.																.	.	.	.	.	.									.	.	.
Template Conservation										.	.	.																				.																.	.	.	.	.	.
Template Sequence		R	K	K	P	I	L	L	V	.	.	.	H	G	D	K	R	E	A	K	A	H	L	H	A	Q	A	K	P	Y	E	.	N	I	S	L	C	Q	A	K	L	D	I	A	F	G	T	.	.	.	.	.	.	H	H	T	K	X	X	L	L	L	Y	E	E	G	L	R	V	V	I	H	T	S	N	L	I	H	A	D	W
Template Known Secondary structure		T	T	S						.	.	.																T	T		T	.	T										S	T	T			.	.	.	.	.	.											S	S											B	S	G	G	G	G
Template Predicted Secondary structure										.	.	.																				.																.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.				.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.							.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		248	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	Q	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	Q	K	T	Q
Template Known Secondary structure		T	S	S
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions