Job Description P0A6H8 Confidence 100.00% Date Thu Jan 5 11:03:10 GMT 2012 Rank 1 Aligned Residues 382 % Identity 15% Template c3hsiC_ PDB info PDB header:transferase Chain: C: PDB Molecule:phosphatidylserine synthase; PDBTitle: crystal structure of phosphatidylserine synthase haemophilus2 influenzae rd kw20 Resolution 2.20 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		A	A	P	L	F	K	L	C	E	R	R	Q	G	I	A	G	V	K	G	N	Q	L	Q	L	M	T	E	S	D	D	V	M	Q	A	L	I	R	D	I	Q	L	A	R	H	N	I	E	M	V	F	Y	I	W	Q	P	G	G	M	A	D	Q	V	A	E	S	L	M	A	A	A	R	R	G	.	.	I	H	C	R	L
Query Conservation																																																																											.	.
Alig confidence																		.																																																									.	.
Template Conservation																		.
Template Sequence		T	K	R	A	E	Q	N	L	N	N	L	P	F	L	A	L	.	Q	A	E	Q	I	E	F	L	G	S	S	A	E	F	K	T	Q	I	I	E	L	I	R	N	A	K	K	R	I	Y	V	T	A	L	Y	W	Q	K	D	E	A	G	Q	E	I	L	D	E	I	Y	R	V	K	Q	E	N	P	H	L	D	V	K	V
Template Known Secondary structure														B				.		G	G	G						S																S	S							S		B		S	S																		T	T
Template Predicted Secondary structure																		.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		178	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure							.																														.	.	.
Query SS confidence							.																														.	.	.
Query Sequence		M	L	D	S	A	.	G	S	V	A	F	F	R	S	P	W	P	E	L	M	R	N	A	G	I	E	V	V	E	A	L	K	V	N	L	.	.	.	M	R	V	F	L	R	R	M	D	L	R	Q	H	R	K	M	I	M	I	D	N	Y	I	A	Y	T	G	S	M	N	M	V	D	P	R	Y	F	K	Q	D	A	G
Query Conservation							.																														.	.	.
Alig confidence							.																														.	.	.																													.													.
Template Conservation																																																																				.													.
Template Sequence		L	I	D	W	H	R	A	Q	R	N	L	L	S	A	T	N	A	D	W	Y	C	E	Q	R	Q	T	Y	Q	L	P	D	D	P	N	X	F	F	G	V	P	I	N	T	R	E	V	F	G	V	L	H	V	K	G	F	V	F	D	D	T	V	L	Y	S	G	A	.	S	I	N	N	V	Y	L	H	Q	F	E	K	.
Template Known Secondary structure					T	T	G	G	G	S																					S	S										S	S	S	S	G	G	G											T	T						S		.		B	S	T	T	T	T	T		S	S		.
Template Predicted Secondary structure																																																																				.													.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.																								.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	Q	W	I	D	L	M	A	R	M	E	G	P	I	A	T	A	M	G	I	I	Y	S	C	D	W	E	I	E	T	G	K	R	I	L	P	P	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	N	I	M	P	F	E	Q	A	S	G	H	T	I	H	T
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	Y	R	Y	D	R	Y	Q	K	I	T	H	A	E	L	A	D	S	X	V	N	F	I	N	D	Y	L	L	D	F	S	A	V	Y	P	L	D	V	T	N	R	P	R	T	K	E	I	R	G	N	I	R	A	Y	R	K	D	L	A	Q	N	G	E	Y	S	L	K	S	A	V	K	L	P	N	V	L	S	V	S
Template Known Secondary structure		.	.																									T	T			T	T	T				S	S	S	S					T	G	G	G																				S	S		B	S	S		S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	S	G	P	G	F	P	E	D	L	I	H	Q	A	L	L	T	A	A	Y	S	A	R	E	Y	L	I	M	T	T	P	Y	F	V	P	S	D	D	L	L	H	A	I	C	T	A	A	Q	R	G	V	D	V	S	I	I	L	P	R	K	N	D	S	M	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	F	G	L	G	A	S	G	N	E	L	N	Q	V	I	E	D	L	F	L	Q	V	Q	K	K	L	V	I	C	T	P	Y	F	N	F	P	R	T	L	Q	H	K	I	A	T	L	L	E	N	G	K	R	V	E	I	I	V	G	D	K	V	A	N	D	F	Y	I	P	P	E	Q	P	F	K	X	A	G	A	L
Template Known Secondary structure							S	S	S	S													T		S	S							S	S	S																T	T										G	G	G	S	T	T				T	T	S				G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
												378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.			440	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																																															.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																																															.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	G	W	A	S	R	A	F	F	T	E	L	L	A	A	G	V	K	I	Y	Q	F	E	G	G	L	L	H	T	K	S	V	L	V	D	G	E	L	S	L	V	G	T	V	N	L	D	M	R	S	L	W	L	N	F	E	I	T	L	A	I	D	D	.	.	K	G	F	G	A	D
Query Conservation		.	.	.	.	.	.	.	.	.	.																																																															.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																																															.	.
Template Conservation
Template Sequence		P	Y	L	Y	E	S	N	L	R	R	F	C	E	K	F	E	T	Q	I	E	S	G	Q	L	V	V	R	L	W	R	D	G	D	N	T	Y	H	L	K	G	V	W	V	D	D	R	Y	I	L	L	T	G	N	N	L	N	P	R	A	W	R	L	D	A	E	N	G	L	L	I	Y	D	P	Q	Q	Q	L	L	A	Q
Template Known Secondary structure																T							T	S									T	T											T	T	T									S	S	T	T	T	T	T	T	S										T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.					.	.	.	.	.	.	.	.		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.									.
Query SS confidence																		.	.	.	.									.
Query Sequence		L	A	A	V	Q	D	D	Y	I	S	R	S	R	L	L	D	.	.	.	.	A	R	L	W	L	K	R	P	.	L	W	Q	R	V	A	E	R	L	F	Y	F	F	S	P	L	L
Query Conservation																		.	.	.	.									.
Alig confidence																		.	.	.	.									.
Template Conservation
Template Sequence		V	E	K	E	Q	N	Q	I	R	Q	H	T	K	V	L	K	H	Y	T	E	L	E	E	L	N	Q	Y	P	E	P	V	Q	K	L	L	K	K	F	A	R	I	K	A	D	K	L
Template Known Secondary structure										G	G	G						S	G	G	G	S			G	G	G	S														T	T
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450