 |
Job Description | P33229 | Confidence | 21.16% | Date | Thu Jan 5 11:51:28 GMT 2012 |
Rank | 33 | Aligned Residues | 27 |
% Identity | 33% | Template | c1k82D_ |
PDB info |
PDB header:hydrolase/dna | Chain: D: PDB Molecule:formamidopyrimidine-dna glycosylase; |
PDBTitle: crystal structure of e.coli formamidopyrimidine-dna2 glycosylase (fpg) covalently trapped with dna
|
Resolution | 2.10 Å |
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | P | C | P | F | C | G | C | P | S | V | T | V | K | A | I | S | G | Y | Y | R | A | K | C | N | G | C | E |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|
|   |   |
|   |   |   |   | . |   |
|
|
|   |
|   |   |
|
|   |
|
|
Template Sequence |   |
E | P | C | R | V | C | G | T | P | I | V | A | T | K | . |
H | A | Q | R | A | T | F | Y | C | R | Q | C | Q |
Template Known Secondary structure |   |
S | B |
| T | T | T |
|
| B |
|  |  |  |  | . |  | T | T |  |  |  |  |  |
| T | T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  | . |  |
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | |
. | . | . | . | . | 260 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|