Job Description P04968 Confidence 100.00% Date Wed Jan 25 15:20:11 GMT 2012 Rank 25 Aligned Residues 313 % Identity 23% Template d1v8za1 SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.21

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		A	E	Y	L	R	A	V	L	R	A	P	V	Y	E	A	A	Q	V	T	P	L	Q	K	M	E	K	L	S	S	R	L	.	D	N	V	I	L	V	K	R	E	D	R	Q	P	V	H	S	F	K	L	R	G	A	Y	A	M	M	A	G	L	T	E	E	Q	K	A	H	G	V	I	T	A	S	A	G	N	H	A	Q
Query Conservation																																	.
Alig confidence																																	.
Template Conservation
Template Sequence		E	E	F	N	R	Q	L	N	Y	Y	L	K	T	W	A	G	R	P	T	P	L	Y	Y	A	K	R	L	T	E	K	I	G	G	A	K	I	Y	L	K	R	E	D	L	V	H	G	G	A	H	K	T	N	N	A	I	G	Q	A	L	L	A	K	F	M	G	K	T	R	L	I	A	E	T	G	A	G	Q	H	G	V
Template Known Secondary structure															T	T			S														T	S	S							G	G	G	S	T	T	S	B	T															T	T									S	S	S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150								.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.																				.	.	.																			.	.	.	.	.	.	.
Query SS confidence																							.	.	.																				.	.	.																			.	.	.	.	.	.	.
Query Sequence		G	V	A	F	S	S	A	R	L	G	V	K	A	L	I	V	M	P	T	A	T	.	.	.	A	D	I	K	V	D	A	V	R	G	F	G	G	E	V	L	L	H	G	.	.	.	A	N	F	D	E	A	K	A	K	A	I	E	L	S	Q	Q	Q	G	.	.	.	.	.	.	.	F	T	W	V	P	P	F	D	H
Query Conservation																							.	.	.																				.	.	.																			.	.	.	.	.	.	.
Alig confidence																							.	.	.																				.	.	.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	A	M	A	G	A	L	L	G	M	K	V	D	I	Y	M	G	A	E	D	V	E	R	Q	K	M	N	V	F	R	M	K	L	L	G	A	N	V	I	P	V	N	S	G	S	R	T	L	K	D	A	I	N	E	A	L	R	D	W	V	A	T	F	E	Y	T	H	Y	L	I	G	S	V	V	G	P	H	P	Y
Template Known Secondary structure										T	T													T	T											T	T								S	T	T	S	S																T	T	T							S	S		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.						.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure			.																		.	.	.	.	.																																																		.	.	.	.	.	.	.
Query SS confidence			.																		.	.	.	.	.																																																		.	.	.	.	.	.	.
Query Sequence		P	.	M	V	I	A	G	Q	G	T	L	A	L	E	L	L	Q	Q	D	.	.	.	.	.	A	H	L	D	R	V	F	V	P	V	G	G	G	G	L	A	A	G	V	A	V	L	I	K	Q	L	M	P	Q	I	K	V	I	A	V	E	A	E	D	S	A	C	L	K	A	A	L	D	A	.	.	.	.	.	.	.
Query Conservation			.																		.	.	.	.	.																																																		.	.	.	.	.	.	.
Alig confidence			.																		.	.	.	.	.																									.																									.	.	.	.	.	.	.
Template Conservation																																																		.
Template Sequence		P	T	I	V	R	D	F	Q	S	V	I	G	R	E	A	K	A	Q	I	L	E	A	E	G	Q	L	P	D	V	I	V	A	C	V	G	G	G	S	N	A	M	G	I	F	Y	P	F	V	.	N	D	K	K	V	K	L	V	G	V	E	A	G	G	K	G	L	E	S	G	K	H	S	A	S	L	N	A	G	Q	V
Template Known Secondary structure																									S	S			S							S	S	S								G	G	G	T	.	T		T	T	S										T	B	G	G	G	T	B	S
Template Predicted Secondary structure																																																		.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
														227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	H	P	V	D	L	P	R	V	G	L	F	A	E	G	V	A	V	K	R	I	G	D	E	T	F	R	L	C	Q	E	Y	L	D	D	I	I	T	V	D	S	D	A	I	C	A	A	M	K	D	L	F	E	D	V	R	A	V	A	E	P	S	G	A	L	A	L	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	F	H	G	M	L	S	Y	F	L	Q	D	E	E	G	Q	I	K	P	T	H	S	I	A	P	G	L	D	Y	P	G	V	G	P	E	H	A	Y	L	K	K	I	Q	R	A	E	Y	V	T	V	T	D	E	E	A	L	K	A	F	H	E	L	S	R	T	E	G	I	I	P	A	L	E	S	A	H	A	V	A
Template Known Secondary structure					T	T							B		T	T	S		B						S	S	T	T	S			S	B											T	T	S																							S			B
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		G	M	K	K	Y	I	A	L	H	N	I	R	G	E	R	L	A	H	I	L	S	G	.	A	N	V	N	F	H	G	L	R	Y	V	S
Query Conservation																								.
Alig confidence												.												.
Template Conservation												.
Template Sequence		Y	A	M	K	L	A	K	E	M	S	.	R	D	E	I	I	I	V	N	L	S	G	R	G	D	K	D	L	D	I	V	L	K	V	S
Template Known Secondary structure									T	S		.	T	T									B	B	S	G	G	G
Template Predicted Secondary structure												.
Template SS confidence
		352	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions