Job Description P04968 Confidence 100.00% Date Wed Jan 25 15:20:11 GMT 2012 Rank 6 Aligned Residues 310 % Identity 27% Template d1pwha_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	Q	V	T	P	L	Q	K	M	E	K	L	S	S	R	L	D	N	V	I	L	V	K	R	E	D	R	Q	P	V	H	S	F	K	L	R	G	A	Y	A	M	M	A	G	L	T	E	E	Q	K	A	H	G	V	I	T	A	S	A	G	N	H	A	Q	G	V	A	F	S	S	A	R	L	G	V	K	A	L	I
Query Conservation
Alig confidence																																																.
Template Conservation																																																.
Template Sequence		L	H	V	K	T	P	L	R	D	S	M	A	L	S	K	V	A	G	T	S	V	F	L	K	M	D	S	S	Q	P	S	G	S	F	K	I	R	G	I	G	H	L	C	K	M	K	.	A	K	Q	G	C	K	H	F	V	C	S	S	A	G	N	A	G	M	A	T	A	Y	A	A	R	R	L	G	L	P	A	T	I
Template Known Secondary structure		S	S																T	S							G	G	G	S	T	T	S	B	T	T												.			T	T									S	S													T	T
Template Predicted Secondary structure																																																.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.
Predicted Secondary structure																																												.																														.
Query SS confidence																																												.																														.
Query Sequence		V	M	P	T	A	T	A	D	I	K	V	D	A	V	R	G	F	G	G	E	V	L	L	H	G	A	N	F	D	E	A	K	A	K	A	I	E	L	S	Q	Q	Q	.	G	F	T	W	V	P	P	F	D	H	P	M	V	I	A	G	Q	G	T	L	A	L	E	L	L	Q	Q	D	A	.	H	L	D	R	V	F	V
Query Conservation																																												.																														.
Alig confidence																																												.																														.
Template Conservation
Template Sequence		V	V	P	S	T	T	P	A	L	T	I	E	R	L	K	N	E	G	A	T	V	E	V	V	G	E	M	L	D	E	A	I	Q	L	A	K	A	L	E	K	N	N	P	G	W	V	Y	I	S	P	F	D	D	P	L	I	W	E	G	H	T	S	L	V	K	E	L	K	E	T	L	S	A	K	P	G	A	I	V	L
Template Known Secondary structure					T	T	S											T	T								S															T	S	T	T						S	S		S																			S	S			S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		P	V	G	G	G	G	L	A	A	G	V	A	V	L	I	K	Q	L	M	.	P	Q	I	K	V	I	A	V	E	A	E	D	S	A	C	L	K	A	A	L	D	A	G	H	P	V	D	L	P	R	V	G	L	F	A	E	G	V	A	V	K	R	I	G	D	E	T	F	R	L	C	Q	E	Y	L	D	D	I	I	T
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		S	V	G	G	G	G	L	L	C	G	V	V	Q	G	L	R	E	V	G	W	E	D	V	P	I	I	A	M	E	T	F	G	A	H	S	F	H	A	A	V	K	E	G	K	L	V	T	L	P	K	I	T	S	V	A	K	A	L	G	V	N	T	V	G	A	Q	T	L	K	L	F	Y	E	H	P	I	F	S	E	V
Template Known Secondary structure				S	S	S														T		T	T	S								T	T	S										T	S					S	S			S	S		G	G	G			S	S										T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.								.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.																					.
Query SS confidence																																			.	.	.	.	.	.	.																					.
Query Sequence		V	D	S	D	A	I	C	A	A	M	K	D	L	F	E	D	V	R	A	V	A	E	P	S	G	A	L	A	L	A	G	M	K	.	.	.	.	.	.	.	K	Y	I	A	L	H	N	I	R	G	E	R	L	A	H	I	L	S	G	A	.	N	V	N	F	H	G	L	R	Y	V	S	E	R	C	E	L	G	E	Q
Query Conservation																																			.	.	.	.	.	.	.																					.
Alig confidence																																			.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		I	S	D	Q	E	A	V	T	A	I	E	K	F	V	D	D	E	K	I	L	V	E	P	A	C	G	A	A	L	A	A	V	Y	S	G	V	V	C	R	L	Q	A	E	A	R	L	Q	T	P	L	A	S	L	V	V	I	V	C	G	G	S	N	I	S	L	A	Q	L	Q	A	L	K	A	Q	L	G	L	N	E	L
Template Known Secondary structure																			S																T									T	T	S	S		S	S										B		S	S													T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		337	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		326	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions