Job Description P04968 Confidence 99.97% Date Wed Jan 25 15:20:11 GMT 2012 Rank 40 Aligned Residues 301 % Identity 17% Template d1kl7a_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.70

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.													.	.	.	.	.	80
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	E	Y	L	R	A	V	L	R	A	P	V	Y	E	A	A	Q	V	T	P	L	Q	K	M	E	K	L	S	S	R	L	D	N	V	I	L	V	K	R	E	D	R	Q	P	V	H	S	F	K	L	R	G	A	Y	A	M	M	A	G	L	T	.	.	.	.	.	.	.	.	.	.	.	.	E	E	Q	K	A	H
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		P	D	A	D	L	K	D	L	I	K	R	.	S	Y	S	T	F	R	S	D	E	V	T	P	L	V	Q	N	V	T	G	D	K	E	N	L	H	I	L	E	L	F	H	G	P	T	Y	A	F	K	D	V	A	L	Q	F	V	G	N	L	F	E	Y	F	L	Q	R	T	N	A	N	L	P	E	G	E	K	K	Q	I
Template Known Secondary structure													.		T	T	T		S	S	T	T	S	S						T	T		S	S	S										S	T	T	S	B	T																					T	T	S		S	S	S
Template Predicted Secondary structure													.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150					.
Predicted Secondary structure																			.																.																.	.	.																								.	.	.	.
Query SS confidence																			.																.																.	.	.																								.	.	.	.
Query Sequence		G	V	I	T	A	S	A	G	N	H	A	Q	G	V	A	F	S	.	S	A	R	L	G	V	K	A	L	I	V	M	P	T	A	.	T	A	D	I	K	V	D	A	V	R	G	F	G	G	E	.	.	.	V	L	L	H	G	A	N	F	D	E	A	K	A	K	A	I	E	L	S	Q	Q	Q	G	.	.	.	.	F
Query Conservation																			.																.																.	.	.																								.	.	.	.
Alig confidence																			.																.																.	.	.																								.	.	.	.
Template Conservation
Template Sequence		T	V	V	G	A	T	S	G	D	T	G	S	A	A	I	Y	G	L	R	G	K	K	D	V	S	V	F	I	L	Y	P	T	G	R	I	S	P	I	Q	E	E	Q	X	T	T	V	P	D	E	N	V	Q	T	L	S	V	T	G	T	F	D	N	C	Q	D	I	V	K	A	I	F	G	D	K	E	F	N	H	N	V
Template Known Secondary structure								S	S	S										T	T		T	T									T	T	S	S														T	T							S	S																S	S					B
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.						.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		T	W	V	P	P	F	D	H	P	M	V	I	A	G	Q	G	T	L	A	L	E	L	L	Q	Q	D	.	.	.	.	.	A	H	L	D	R	V	F	V	P	V	G	G	G	G	L	A	A	G	V	A	V	L	I	K	Q	L	M	P	Q	I	K	V	I	A	V	E	A	E	D	S	A	C	L	K	A	A	L	D	A
Query Conservation																												.	.	.	.	.
Alig confidence								.																				.	.	.	.	.																																								.
Template Conservation								.																																																																.
Template Sequence		G	A	V	N	S	I	.	N	W	A	R	I	L	A	Q	X	T	Y	Y	F	Y	S	F	F	Q	A	T	N	G	K	D	S	K	K	V	K	F	V	V	P	S	G	N	F	G	D	I	L	A	G	Y	F	A	K	K	X	G	L	P	I	E	K	L	A	I	A	T	N	E	N	.	D	I	L	D	R	F	L	K	S
Template Known Secondary structure						S		.																					S	S	S	S											S	S	S													T												S		.
Template Predicted Secondary structure								.																																																																.
Template SS confidence
		237	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.
		227	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260																																										.	.	.	.
Predicted Secondary structure											.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	H	P	V	D	L	P	R	V	.	G	L	F	A	E	G	V	A	V	K	R	I	G	D	E	T	F	R	L	C	Q	E	Y	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	I	T
Query Conservation											.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	Y	E	R	S	D	K	V	A	A	T	L	S	P	A	X	D	I	L	I	S	S	N	F	E	R	L	L	W	Y	L	A	R	E	Y	L	A	N	G	D	D	L	K	A	G	E	I	V	N	N	W	F	Q	E	L	K	T	N	G	K	F	Q	V	D	K	S	I	I	E	G	A	S	K	D	F	T	S	E	R
Template Known Secondary structure		S						S	S					S		G	G	G			S	S		T	T													T	S	T	T																				S													T	T	T
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.					.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		V	D	S	D	A	I	C	A	A	M	K	D	L	F	E	D	V	.	.	.	.	R	A	V	A	E	P	S	G	A	L	A	L	A	G	M	K	K	Y	I	A	L	H	N	I	R	G	E	R	L	A	H	I	L	S	G
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.
Template Conservation
Template Sequence		V	S	N	E	E	T	S	E	T	I	K	K	I	Y	E	S	S	V	N	P	K	H	Y	I	L	D	P	H	T	A	V	G	V	C	A	T	E	R	L	I	A	K	D	N	D	K	S	I	Q	Y	I	S	L	S	T	A
Template Known Secondary structure																				S	S	T	T																								T	T	S								B
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions