Job Description P04968 Confidence 100.00% Date Wed Jan 25 15:20:11 GMT 2012 Rank 14 Aligned Residues 305 % Identity 21% Template d1jbqa_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.																								.	.																																		.	.
Query SS confidence																				.	.																								.	.																																		.	.
Query Sequence		Q	P	L	S	G	A	P	E	G	A	E	Y	L	R	A	V	L	R	.	.	A	P	V	Y	E	A	A	Q	V	T	P	L	Q	K	M	E	K	L	S	S	R	L	D	.	.	N	V	I	L	V	K	R	E	D	R	Q	P	V	H	S	F	K	L	R	G	A	Y	A	M	M	A	G	L	T	E	E	Q	K	.	.
Query Conservation																				.	.																								.	.																																		.	.
Alig confidence																				.	.																								.	.																																		.	.
Template Conservation
Template Sequence		R	P	A	S	E	S	P	H	H	H	T	A	P	A	K	S	P	K	I	L	P	D	I	L	K	K	I	G	D	T	P	M	V	R	I	N	K	I	G	K	K	F	G	L	K	C	E	L	L	A	K	C	E	F	F	N	A	G	G	S	V	K	D	R	I	S	L	R	M	I	E	D	A	E	R	D	G	T	L	K
Template Known Secondary structure		S		G	G	G			S										S	S		S	S	G	G	G	G	S	S									S					T	T			S							G	G	G	S	T	T	S	B	T																T		S
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
			79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	H	G	V	I	T	A	S	A	G	N	H	A	Q	G	V	A	F	S	S	A	R	L	G	V	K	A	L	I	V	M	P	T	A	T	A	D	I	K	V	D	A	V	R	G	F	G	G	E	V	L	L	H	G	A	N	F	D	E	A	K	A	K	A	I	E	L	S	Q	Q	Q	G	F	T	W	V	P	P	F
Query Conservation		.
Alig confidence		.																																																									.
Template Conservation																																																											.
Template Sequence		P	G	D	T	I	I	E	P	T	S	G	N	T	G	I	G	L	A	L	A	A	A	V	R	G	Y	R	C	I	I	V	M	P	E	K	M	S	S	E	K	V	D	V	L	R	A	L	G	A	E	I	V	R	T	P	T	E	.	S	H	V	G	V	A	W	R	L	K	N	E	I	P	N	S	H	I	L	D	Q	Y
Template Known Secondary structure		T	T								S	S														T									S													T	T										.													S	T	T						T	T
Template Predicted Secondary structure																																																											.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		158	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure							.																	.
Query SS confidence							.																	.
Query Sequence		D	H	P	M	V	.	I	A	G	Q	G	T	L	A	L	E	L	L	Q	Q	D	A	.	H	L	D	R	V	F	V	P	V	G	G	G	G	L	A	A	G	V	A	V	L	I	K	Q	L	M	P	Q	I	K	V	I	A	V	E	A	E	D	S	A	C	L	K	A	A	L	D	A	G	H	P	V	D	L	P	R	V
Query Conservation							.																	.
Alig confidence							.																	.
Template Conservation
Template Sequence		R	N	A	S	N	P	L	A	H	Y	D	T	T	A	D	E	I	L	Q	Q	C	D	G	K	L	D	M	L	V	A	S	V	G	T	G	G	T	I	T	G	I	A	R	K	L	K	E	K	C	P	G	C	R	I	I	G	V	D	P	E	G	S	I	L	A	E	P	E	E	L	N	Q	T	E	Q	T	T	Y	E	V
Template Known Secondary structure		T		T									T										T	T										S	S	S															T	T									T	T		S		S	S	S	G	G	G	G			S					S
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	F	A	E	G	V	A	V	K	R	I	G	D	E	T	F	R	L	C	Q	E	Y	L	D	D	I	I	T	V	D	S	D	A	I	C	A	A	M	K	D	L	F	E	D	V	R	A	V	A	E	P	S	G	A	L	A	L	A	G	M	K	K	Y	I	A	L	H	N	I	R	G	E	R	L	A	H	I	L	S
Query Conservation
Alig confidence															.	.	.	.	.	.	.																																																		.
Template Conservation															.	.	.	.	.	.	.																																																		.
Template Sequence		E	G	I	G	Y	D	F	I	P	T	V	L	D	.	.	.	.	.	.	.	R	T	V	V	D	K	W	F	K	S	N	D	E	E	A	F	T	F	A	R	M	L	I	A	Q	E	G	L	L	C	G	G	S	A	G	S	T	V	A	V	A	V	K	A	A	Q	E	L	Q	.	E	G	Q	R	C	V	V	I	L	P
Template Known Secondary structure			S				S	S			T	T			.	.	.	.	.	.	.	G	G	G																							S				B															G	G	G			.	T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.																																																		.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.								.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.
		316	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	V
Template Known Secondary structure		B	B	G
Template Predicted Secondary structure
Template SS confidence
		376	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions