Job Description P04968 Confidence 100.00% Date Wed Jan 25 15:20:11 GMT 2012 Rank 35 Aligned Residues 307 % Identity 17% Template d1j0aa_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.50

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		12	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.
Predicted Secondary structure														.																																			.	.																											.
Query SS confidence														.																																			.	.																											.
Query Sequence		E	G	A	E	Y	L	R	A	V	L	R	A	.	P	V	Y	E	A	A	Q	V	T	P	L	Q	K	M	E	K	L	S	S	R	L	D	N	V	I	L	V	K	R	E	D	R	Q	P	.	.	V	H	S	F	K	L	R	G	A	Y	A	M	M	A	G	L	T	E	E	Q	K	A	H	G	V	I	.	T	A	S	A
Query Conservation														.																																			.	.																											.
Alig confidence														.																																			.	.																											.
Template Conservation
Template Sequence		M	H	P	K	I	F	A	L	L	A	K	F	P	R	V	E	L	I	P	W	E	T	P	I	Q	Y	L	P	N	I	S	R	E	I	G	A	D	V	Y	I	K	R	D	D	L	T	G	L	G	I	G	G	N	K	I	R	K	L	E	Y	L	L	G	D	A	L	S	K	G	A	D	V	V	I	T	V	G	A	V	H
Template Known Secondary structure											T	T									S															T	S							G	G	G	S		S	T	T		S	T															T	T		S								T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.						.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.
Predicted Secondary structure																																				.														.	.	.	.	.																								.	.
Query SS confidence																																				.														.	.	.	.	.																								.	.
Query Sequence		G	N	H	A	Q	G	V	A	F	S	S	A	R	L	G	V	K	A	L	I	V	M	P	T	A	T	A	D	I	K	V	D	A	V	.	R	G	F	G	G	E	V	L	L	H	G	A	N	.	.	.	.	.	F	D	E	A	K	A	K	A	I	E	L	S	Q	Q	Q	G	F	T	W	V	P	P	F	.	.	D	H
Query Conservation																																				.														.	.	.	.	.																								.	.
Alig confidence																																				.														.	.	.	.	.																								.	.
Template Conservation
Template Sequence		S	N	H	A	F	V	T	G	L	A	A	K	K	L	G	L	D	A	I	L	V	L	R	G	K	E	E	L	K	G	N	Y	L	L	D	K	I	M	G	I	E	T	R	V	Y	D	A	K	D	S	F	E	L	M	K	Y	A	E	E	I	A	E	E	L	K	R	E	G	R	K	P	Y	V	I	P	P	G	G	A	S
Template Known Secondary structure															T	T									S				S										T	T							S			S	T	T	T													T	T	S	S								G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		P	M	V	I	A	G	Q	G	T	L	A	L	E	L	L	Q	Q	D	A	.	H	L	D	R	V	F	V	P	V	G	G	G	G	L	A	A	G	V	A	V	L	I	K	Q	L	M	P	Q	I	K	V	I	A	V	E	A	E	D	S	A	C	L	K	A	A	L	D	A	G	H	P	V	D	L	P	R	V	G	L	F
Query Conservation																					.
Alig confidence																					.																																																		.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.
Template Sequence		P	I	G	T	L	G	Y	V	R	A	V	G	E	I	A	T	Q	S	E	V	K	F	D	S	I	V	V	A	A	G	S	G	G	T	L	A	G	L	S	L	G	L	S	I	L	N	E	D	I	R	P	V	G	I	A	V	G	R	F	G	E	V	M	T	S	K	L	D	N	.	.	.	.	.	.	.	.	.	L	I
Template Known Secondary structure						T																		S							S	S	S													T	T											S	S		S	S	S								.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.										230	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		A	E	G	V	A	V	K	R	I	G	D	E	T	F	R	L	C	Q	E	Y	L	D	D	I	I	T	V	D	S	D	A	I	C	A	A	M	K	D	L	F	E	D	V	R	A	V	A	E	P	S	.	G	A	L	A	L	A	G	M	K	K	Y	I	A	L	H	N	I	R	G	E	R	L	A	H	I	L	S	G	A
Query Conservation																																																				.
Alig confidence																																																				.																		.
Template Conservation																																																																						.
Template Sequence		K	E	A	A	E	L	L	G	V	K	V	E	V	R	P	E	L	Y	D	Y	S	F	G	E	Y	G	K	I	T	G	E	V	A	Q	I	I	R	K	V	G	T	R	E	G	I	I	L	D	P	V	Y	T	G	K	A	F	Y	G	L	V	D	L	A	R	K	G	E	L	.	G	E	K	I	L	F	I	H	T	G	G
Template Known Secondary structure								T	T					S								S	T	T	S	T	T																		S					T	T	T														T	T		S	.		S
Template Predicted Secondary structure																																																																						.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310
		318	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	N	F	H	G	L	R	Y	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	G	T	F	H	Y	G	D	K	L
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions